Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2771g00010 ATGCCCAGTTCCGGCGACGCCATTCCCATGTCCAAGAAGAAGAAGAAGCTCTTATTCTTCGCCTTCCTTACTACCCTGCTCCTCGTCTCGGCCACTGTCGGCATTGTCGCCGGAGTTAACTCCCGCAATAACTCCGACGCTGACATCGACAACATCCATTTCACCCCGTCACACCACATAGTCAAAACTGCTTGCAGTTCCACGTTGTACCCTGAACTCTGCTTCTCCGCCATCACCGCCGAACCCGGCTTCACCGAGAAAGTCTCCACTCACAGAGACGTTATAGAACTGTCCCTCAACGTAACAGTCAGATCCGTAAAGCAGAATAAGTTCATCGTCAAGAAAATCCAAGCCAAGAAAGGCCTGTCCAAGAGACAGAAAGTGGCTCTTCGTGATTGCTTGGAAACCATTCAAGACACCCTGTTCGAACTCGGTCGTGTCATCGCCGACCTGAAGAACTCCGCTAATCGCGCCGACGACATCAAAACTTTTCTTAGCACTGCCATCACCAACCAGGAAACCTGCCTGGACGGGTTCTCCTTCAACAACGCCGATAGACGAGTGAGAAAAGGGCTGAGCTCCGGGCAAGTCCACGTGGAACGCTTGTGCAGCAATGCGCTGGCGATGTTTAAGAACATGACTGGCCATGAAATGCCAAGTCGCAGCAACAGAAAATTGATGGAACTGGAGGAGGTGGATGGTGGTACGTGGCCGGCATGGATGACGGCCGAGGACAGGCGGCTTCTGCAGTCGGGGACGGAGACTGCAAACGTGGTGGTGGCTGCAGATGGGAGTGGCAATTACAGGACGGTGTCGGAGGCGGTTGCAGCGGCGCCGGCGAGGAGTAGCACGAGGTATGTGATAAGAATAAAAGCGGGGGTGTATAGAGAGAACGTGGAGGTGCCGAGCTCGAAGACGAATATAATGTTTGTGGGAGATAGCAGAACCAACACTATCATCACAGGAAGCAGAAATGTGGTGGATGGAAGCACAACCTTTAACTCTGCAACTGTGGCTGCAGTAGGAGACGGCTTCATGGCTCGAGAAATAACCTTCCAAAACTCAGCGGGGCCATCAAAGGGCCAAGCCGTGGCTCTACGAGCCGGAGCCGATCTCTCCGCTTTCTACAGATGCGCCTTCCTAGCTTACCAGGACACCCTCTACGTCCACAGCAACCGCCAGTTCTTCACTGACTGCCTCGTTGTCGGCACCGTCGACTTCATCTTCGGCAACTCCGCCGCCGTCTTACAGAACTGCGACATCCGCCCTCGTCTCCCCCTCCGCGGCCAGAGCAACATGGTCACCGCCCAAGGAAGATCCGATCCTAACCAGAACACCGGCATCGTCATCCAAAACTCCAAGATCACCGCCAACTCGGATCTGGAGGCACAGAAGGGAAGTGTGAGATCGTACCTTGGGAGGCCATGGAGGGAATATTCGAGGACTGTGATAATGAAGACTTACATAGACGATGTGATAGACCCGGAAGGGTGGCACCGTTGGGATGGGGACTTTGCGTTGGACACTTTGTTCTACGGCGAGTATCAGAACACCGGAAGTGGTGCTGATACGTCTAGGAGGGTTAACTGGAAAGGCTTTAACGTTATTACTAGTGCTTCTGAAGCTCAAACTTTTACTGCTCAAAACTTCATTGAAGGCTCAGGCTGGTTATCCTCCACTGGCTTTCCATATACTCTTGGCCTATAA 1707 0.5313 MPSSGDAIPMSKKKKKLLFFAFLTTLLLVSATVGIVAGVNSRNNSDADIDNIHFTPSHHIVKTACSSTLYPELCFSAITAEPGFTEKVSTHRDVIELSLNVTVRSVKQNKFIVKKIQAKKGLSKRQKVALRDCLETIQDTLFELGRVIADLKNSANRADDIKTFLSTAITNQETCLDGFSFNNADRRVRKGLSSGQVHVERLCSNALAMFKNMTGHEMPSRSNRKLMELEEVDGGTWPAWMTAEDRRLLQSGTETANVVVAADGSGNYRTVSEAVAAAPARSSTRYVIRIKAGVYRENVEVPSSKTNIMFVGDSRTNTIITGSRNVVDGSTTFNSATVAAVGDGFMAREITFQNSAGPSKGQAVALRAGADLSAFYRCAFLAYQDTLYVHSNRQFFTDCLVVGTVDFIFGNSAAVLQNCDIRPRLPLRGQSNMVTAQGRSDPNQNTGIVIQNSKITANSDLEAQKGSVRSYLGRPWREYSRTVIMKTYIDDVIDPEGWHRWDGDFALDTLFYGEYQNTGSGADTSRRVNWKGFNVITSASEAQTFTAQNFIEGSGWLSSTGFPYTLGL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2771g00010 568 SUPERFAMILY Pectin lyase-like 255 567 IPR011050 -
Pral2771g00010 568 CDD PMEI-like_3 63 215 - -
Pral2771g00010 568 SMART PMEI_2 56 209 IPR006501 GO:0004857
Pral2771g00010 568 Pfam Pectinesterase 257 553 IPR000070 GO:0030599|GO:0042545
Pral2771g00010 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 214 IPR035513 -
Pral2771g00010 568 Gene3D - 252 568 IPR012334 -
Pral2771g00010 568 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Pral2771g00010 568 Pfam Plant invertase/pectin methylesterase inhibitor 60 209 IPR006501 GO:0004857
Pral2771g00010 568 FunFam Pectinesterase 57 214 - -
Pral2771g00010 568 FunFam Pectinesterase 251 568 - -
Pral2771g00010 568 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Pral2771g00010 568 PANTHER PECTINESTERASE 32 558 - -
Pral2771g00010 568 NCBIfam pectinesterase inhibitor domain 56 213 IPR006501 GO:0004857
Pral2771g00010 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 214 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2771g00010 Pral-Chr2771 54338 57676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2771g00010 12 568 Carbohydrate Esterase AT3G14310 58.532 0.0 661