Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2769g00008 ATGGTCTTCGCTCTTCAGCACTTATTATCTAAAGGTTTTGGTCATCAGGTAGGGAAGGGTTTTACTATGCCCAGCAGCCTGGGAAAGCGAATTATGCACAAGAGGGTTTTTATACTTCCCAAGCTCCAACTTCTCCCAGCAATCACGGAGATAACTCAGAGATTTTCTAGTGAAAATATTATAGGGGAGGGGGGATTTGGTCGTGTGTACAAGGGTTGGCTTTCAGATGGAAAAGAAGTTGCCGTGAAGCAGCTTAAGGCTGGCAGCGGCCAGGGTGAACGGGAATTTAGGGCAGAGGTTGAAATTATAAGCCGAGTTCATCATCGGCATTTGGTATCATTAGTTGGCTATTGCATAGCTGATCACCGAAGAGTGCTTATCTATGAGTTCCTTCCCAATAAAACTCTTGAATATCACTTGCATGCCAGAGGAGTGAAAGTCTTAGATTGGGAGAAGAGGATGAAGATTGCAATTGGCTCTGCAAAAGGCTTAGCATATTTGCATGAAGACTGCAACCCAAAAATTATCCACAGAGATATTAAGTCGGCAAACATACTTTTGGATAATGCGTTTGAGGCACAGGTTGCAGACTTTGGACTTGCTAGGCTACATGACGATGATAACACGCACGTATCAACTCGGGTTATGGGGACTTTTGGGTACATGGCTCCAGAGTATGCAACAAGCGGAAAATTGACCGATAGATCAGATGTTTTCTCCTTCGGAGTTGTCCTCCTTGAACTCATAACAGGGAGGAAACCTGTCGATCAGACGCGGCCCGTGGGAGAAGAAAGTTTGGTTGAGTGGGCTCGTCCCCTTCTTCATCGTGCTATTGAGACCCGAGACTTCAGCGAATTAGAGGACGAAAGGCTTAACAAGCAATTTGTGGAGAGCGAGATGTGCAGAATGATTGAAGCTGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCATTGGATAGTCAAGATGAATCATGTGATTTATCAAATGGGGTTAAATATGGTCAGAGCACCATTTATGATGATGGCCACTATAGTGAAGACGCTATTATGAAGTTCAGGAAGATGGCCATTGACAGCTGTAGTGAATCTGAATTTGATAGGGACAGTGGAGATTGCTGTTCTTCAGTAGAGCTTTCTGGACAACAACATTCATGGCTCAAGGGCACTTCAAGCGGGGAGTCAGAGTGCCGGGCTTTCAATGCAAGTAGAAGGACTTAG 1248 0.4535 MVFALQHLLSKGFGHQVGKGFTMPSSLGKRIMHKRVFILPKLQLLPAITEITQRFSSENIIGEGGFGRVYKGWLSDGKEVAVKQLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCIADHRRVLIYEFLPNKTLEYHLHARGVKVLDWEKRMKIAIGSAKGLAYLHEDCNPKIIHRDIKSANILLDNAFEAQVADFGLARLHDDDNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTRPVGEESLVEWARPLLHRAIETRDFSELEDERLNKQFVESEMCRMIEAAAACVRHSAPKRPRMVQVVRALDSQDESCDLSNGVKYGQSTIYDDGHYSEDAIMKFRKMAIDSCSESEFDRDSGDCCSSVELSGQQHSWLKGTSSGESECRAFNASRRT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2769g00008 415 FunFam proline-rich receptor-like protein kinase PERK8 131 343 - -
Pral2769g00008 415 ProSiteProfiles Protein kinase domain profile. 55 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2769g00008 415 SMART serkin_6 55 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2769g00008 415 Gene3D Phosphorylase Kinase; domain 1 26 130 - -
Pral2769g00008 415 Pfam Protein tyrosine and serine/threonine kinase 58 328 IPR001245 GO:0004672|GO:0006468
Pral2769g00008 415 Gene3D Transferase(Phosphotransferase) domain 1 131 347 - -
Pral2769g00008 415 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 48 372 IPR047117 -
Pral2769g00008 415 SUPERFAMILY Protein kinase-like (PK-like) 34 328 IPR011009 -
Pral2769g00008 415 FunFam Proline-rich receptor-like protein kinase PERK8 31 130 - -
Pral2769g00008 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Pral2769g00008 415 CDD STKc_IRAK 61 329 - -
Pral2769g00008 415 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2769g00008 Pral-Chr2769 61268 64943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2769g00008 48 381 Trihelix Transcription Factor Family AT1G70460 75.449 0.0 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral2769g00008 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2769g00008 - - pcin:129322412 671.389