Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2767g00003 ATGGAGGCGTTGCAGGGAGAAGTGGATCGGGTTAAGGGTCCCTGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCAACAGCACGGCGCTCGAAATTGGTCGGTGATAAGCAAGGCGATCCCCGGACGATCTGGAAAGTCGTGCCGGCTCCGGTGGTGCAACCAGCTCTCACCGGATGTAGAGCGTGGTGCCTTCACTCCCGAGGAAGACGAGATCATCGTCAAGGCACACGCTAAGTTCGGCAACAAATGGGCCACCATAGCCAAGCTCCTTAACGGCCGTACGGATAACTCCGTCAAAAACCACTGGAACTCTACGTTGAAGCGCAAGTACTCATCATTGGTCGACAACGTCGAAGATCCATCGCTCCTACCAGCGAAGAAGCCGGCCACCGGAGACCGATCGCTGACGATTCCACCGGTATTAGCGGGTCATTGTTACAGCCCGAGCAGCCAAACTGGATCTGATGTAAGCGATTCGGGTCATCAGGTAGTCTCTGATCCTCCGACTCTGGTTCGGCCTGAATCGAGACCGCCGGATGCGATCTTGAACAACGATCTCTCCACAGAACTCACTCTGTCTCTTCCTGGAGCCAAGTCGAAGGAGTTATGGATGGTTAAAGATTCAGGCCCTATCGCAGAGCGCGAGAAGGCATTAACAACATCAATACTATTATCAACGGAGACGAGGCACAGTGGAATCACCACATTTGGGCCAGAGTTAATGGCAGTGATGAAGGAGATGATAAGGGATGAAGTGAGAAATTACATGGCGGCGTTGTGA 789 0.5374 MEALQGEVDRVKGPWSPEEDELLRQHVQQHGARNWSVISKAIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKYSSLVDNVEDPSLLPAKKPATGDRSLTIPPVLAGHCYSPSSQTGSDVSDSGHQVVSDPPTLVRPESRPPDAILNNDLSTELTLSLPGAKSKELWMVKDSGPIAEREKALTTSILLSTETRHSGITTFGPELMAVMKEMIRDEVRNYMAAL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2767g00003 262 Gene3D - 11 63 - -
Pral2767g00003 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Pral2767g00003 262 SMART sant 63 111 IPR001005 -
Pral2767g00003 262 SMART sant 11 60 IPR001005 -
Pral2767g00003 262 MobiDBLite consensus disorder prediction 145 185 - -
Pral2767g00003 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Pral2767g00003 262 FunFam MYB transcription factor 12 63 - -
Pral2767g00003 262 CDD SANT 14 56 IPR001005 -
Pral2767g00003 262 Gene3D - 65 124 - -
Pral2767g00003 262 MobiDBLite consensus disorder prediction 148 167 - -
Pral2767g00003 262 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Pral2767g00003 262 FunFam Transcription factor MYB44 66 112 - -
Pral2767g00003 262 PANTHER MYB PROTEIN-RELATED 12 160 - -
Pral2767g00003 262 Pfam Myb-like DNA-binding domain 15 72 - -
Pral2767g00003 262 CDD SANT 66 109 IPR001005 -
Pral2767g00003 262 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Pral2767g00003 262 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2767g00003 Pral-Chr2767 18980 20219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2767g00003 9 262 MYB Transcription Factor Family AT5G67300 46.897 1.27e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2767g00003 Myb_DNA-bind_6 2.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2767g00003 K09422 - qsa:O6P43_031073 271.552