Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2758g00005 ATGGCACATAGTGGCAGAGGAGAATCTTCTTCCAGCTCTGGTCCTTGTAATTCACCTCCTAACTGGAAATATGATGTGTTCTTGAGTTTTGCAGGAAAAGACACTCGCTTGAAGTTTACGAATCACTTAGATGAAGCTTTCAAAAGAAGTGGCATCAAAACTTTCAGGGATGATGTAGATCTTGAGAGAGGGAGAAACATAAAACAGAGTCTCTTTCAAGCAATTCAGCATTCTCTGTGTGCAGTCGTTATTATCTCAAAAACTTATGCAAATTCTAAATGGTGTTTGGATGAGCTTCAAGAGATTGTTGAATCTCAAAATACAAATGGTGTTTTTCCAATCTTCTATGACGTTGACCCAGCCGATGCTCGGGAAAAAGGATGGGATGAGATTTCCGTCCCATATCTTGTGGGATTGGGATGGCGTGAAGCAGATCTTATAGAAGAAATAGTCAGAGAAGTATGGACTTATTTACTTCCTAAATTACCATCTTATGGTCACAATCTGGTTGGGATTGAGTCAAGAGCGACTGATATGATATCATATTTGGAGATTGGGGTGGATGACATGCGTTTTGTAGGGATATGGGGTATGGGTGGTGTGGGTAAAACAACTCTTGCTAAAGTTGTTTTTGAAAAACTATCCCGCAAGTTTGAAGTGTGCTGCTTTCTTGATAATGTCAGAGAAACATTCAAAAAAGAAGGCAACGTCGTCTCTTTGCAAAAAAGGCTTCTTTCTCGTCTCCAAATAAAATACATGGATTATGGTGAATATGAAGGAATGGAGATGATAAGAAACCGTCTCTGCAATAAAAAGGTTCTTCTAGTCATTGATGATGTAGATCATGAGAATCAAGTAAATAATTTGGCTCAAAGTCCAAATTGGTTTGGTAAAGGAAGCAGAATAATTTTTACAACAAGAGATAAGCACTTGCTCATCTCATCTGGAGTAGATGAGCAAAGAATATATGAGATGAAAACCAGGAAGGAAGGTGAAGCTCTTGAACTCTTTTCAAACAAAGCATTCAACGAAGGCCATCTTCCTGATGAGGATTATTTGAAGTTATCTAAATCTGTAATTGAATATGCACAAGGTCTTCCTTTGGCACTTACAGTTTTGGGTTCTTTTCTTCGAAGAAGAAAAAAAGCTGTTTGGGAAGATACTTTAGATAAATTGAAGAAAAGTTATCTTGCTAAAGATATTTCCCAAGTGCTTAAAATAAGTTATGATGGATTGGATGAGAAACAACAGGCAATATTTTTAGATATTGCTTGTTTTTTCAAGGGTTGGTTGAAAGAAGAAGTGACTCAAGTGTTGGAAAGTTGTGGTCTTAACCCAGTCGTTGGAATAGATGTCTTGATTGAAAGAACTTTACTAGTTGAAACGAAAGATTCTACATTAGAGATGCATGATTTACTTCAAAAGCTGGGTAGGAATATAGTTCATCAAGACTCACCCAAGAATGTTGGCAAGCGTAGCAGGTTGTGGGAGTTTAAGGACATCAAGGAAGTATTGGAAAATAACACAGGATCTGAGGCAATAGAAGCTATTTTTATGCAAGGTTTGTTTGAGGACAGGCAAGATAAAATAGAAGTACATCCTGAAGCCTTTTCAAAGATGAGTAACCTTAGGCTCTTCTTATGTACGATGGGTGGCAATCCGTTCATGTTCCCCGGGGAATGGAAATTTTTGGCTGGTGCATTAAAAGTTGTTGAATGGTCATATCCTTTGAAAGCTTTTCCACCTGAAACTCAATTGAATGAACTTGTTGAAATGCGTATGTCATATAGCAAAATAAAGCAACTTTGGAACAACAAACAGCCTATGACAAAGTTGAAATCTATCAAATTGGCAAATTCTCTCAATTTGACTGAAACTCCAGACTTATCAGGTGTTCCAAATTTAGAACATTTACATCTTGGTGGATGCACATCTCTTGTCAAGGTTCATCCCTCCCTTGGACAGTTGAGAAAGCTTGTTGAGGTGGACTTGAATAATTGTGCAAACATTGAAATCCTACCAAAAAAATTGGAAACAAATTCTTTGGTGAAGTTAAACCTTAGGGGGTGTAAAAAAGTTGCAGAGCTCCCAGAGTTTGGGAAAGGTATGGAAAAAATATCATATCTTGATGTGGGTGCTACTTCTATAACAAGACTTCCTGAATCAGTTGGATCCTTGACGGGTCTTAGATATTTAAATTTGAGTGGCTGCAAAATTGAAAATCTTAACAAGTTGTTGAAGACTCATGTAAGTCACCAAATTTCCAACTTGAATGTAACGTTCTTAACGGAGTTATATTTAAGCAGGTGTGGCTTAGATGATGGATCAATTCCTGATTTTGACAGTTTATCATCGCTCATTATATTGGAACTAAGTGGTAATGATTTTGTGAATCTACCCATTGGTTGCTTCTCTGGTCTTTCTCGACTTGTCTCTCTTTCGTTAGATTGTTGCCGAAGCCTTACGTCATTGCCAAGGCTTCCACCACGGTTGATTCGATTAAATGCCTCCAATTGTGATTCAATGGAACCTTTATCATCAGATGGACAGTTATGGAATTTGGTTGCTTCACTTGACCATGAGTGTCGTGGGCGAACTAAATATGAAATCTATGATGATGAGGAAGATGCTGATTTTGTGCCATTCAAGGCAGGTAAAAGGCCTCCCCCACTGAGAGATTTCTGTGCAATTCTTCCAGGATACGAAATACCATCATGGTTTCCAACTAAAGAAGATTGCCCTTTCGATAAGTGGGGGGAATACGAGATGAAAGTGGACATACCTCCATATTTTCGTGACAGTGAATGGTGCGGAATTGTTGTGTGCTCCCATATGTCAGCTTATGGTGATGGTTTTTGGGACGTTGGTTGGAGTAGTAAAGCTGCAGAAGATGATGATGATTATAAACCCAAAGGGTGGGAGCATGATATTCCTTTCTCCATTTCCGAAAAGCAGTGCATAATGGTGTTGGAATTAAATGAGGAAACATGTTGGCGGCACCTAAGAGCTCATCATAGCAATTCCCTTCACATTCTACTTTCTGTTCAACCACTTGGTTACGATATAGAAGTAAAGGAATGTGGGTGGAGAGTGATACGTAAAGAAGAGATACAAGATTGGTGCCATCTTAATGGTTTCTTCAACCAAGCCACCCAACCCCAGCTTGCTTCTTCTGATGAGGTCAAGCTTCCGCGGAGAGCACTTAAAGAATTCTTTTTGGGGGAGATGTATTTGAGTTTCTGA 3243 0.3876 MAHSGRGESSSSSGPCNSPPNWKYDVFLSFAGKDTRLKFTNHLDEAFKRSGIKTFRDDVDLERGRNIKQSLFQAIQHSLCAVVIISKTYANSKWCLDELQEIVESQNTNGVFPIFYDVDPADAREKGWDEISVPYLVGLGWREADLIEEIVREVWTYLLPKLPSYGHNLVGIESRATDMISYLEIGVDDMRFVGIWGMGGVGKTTLAKVVFEKLSRKFEVCCFLDNVRETFKKEGNVVSLQKRLLSRLQIKYMDYGEYEGMEMIRNRLCNKKVLLVIDDVDHENQVNNLAQSPNWFGKGSRIIFTTRDKHLLISSGVDEQRIYEMKTRKEGEALELFSNKAFNEGHLPDEDYLKLSKSVIEYAQGLPLALTVLGSFLRRRKKAVWEDTLDKLKKSYLAKDISQVLKISYDGLDEKQQAIFLDIACFFKGWLKEEVTQVLESCGLNPVVGIDVLIERTLLVETKDSTLEMHDLLQKLGRNIVHQDSPKNVGKRSRLWEFKDIKEVLENNTGSEAIEAIFMQGLFEDRQDKIEVHPEAFSKMSNLRLFLCTMGGNPFMFPGEWKFLAGALKVVEWSYPLKAFPPETQLNELVEMRMSYSKIKQLWNNKQPMTKLKSIKLANSLNLTETPDLSGVPNLEHLHLGGCTSLVKVHPSLGQLRKLVEVDLNNCANIEILPKKLETNSLVKLNLRGCKKVAELPEFGKGMEKISYLDVGATSITRLPESVGSLTGLRYLNLSGCKIENLNKLLKTHVSHQISNLNVTFLTELYLSRCGLDDGSIPDFDSLSSLIILELSGNDFVNLPIGCFSGLSRLVSLSLDCCRSLTSLPRLPPRLIRLNASNCDSMEPLSSDGQLWNLVASLDHECRGRTKYEIYDDEEDADFVPFKAGKRPPPLRDFCAILPGYEIPSWFPTKEDCPFDKWGEYEMKVDIPPYFRDSEWCGIVVCSHMSAYGDGFWDVGWSSKAAEDDDDYKPKGWEHDIPFSISEKQCIMVLELNEETCWRHLRAHHSNSLHILLSVQPLGYDIEVKECGWRVIRKEEIQDWCHLNGFFNQATQPQLASSDEVKLPRRALKEFFLGEMYLSF 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2758g00005 1080 Gene3D - 329 413 IPR042197 -
Pral2758g00005 1080 Gene3D - 157 318 IPR027417 -
Pral2758g00005 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 423 IPR027417 -
Pral2758g00005 1080 Gene3D - 17 156 IPR035897 -
Pral2758g00005 1080 Gene3D Ribonuclease Inhibitor 526 703 IPR032675 -
Pral2758g00005 1080 SMART till_3 23 165 IPR000157 GO:0007165
Pral2758g00005 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 125 IPR035897 -
Pral2758g00005 1080 Pfam TIR domain 23 125 IPR000157 GO:0007165
Pral2758g00005 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 698 IPR044974 GO:0006952
Pral2758g00005 1080 SUPERFAMILY "Winged helix" DNA-binding domain 400 506 IPR036390 -
Pral2758g00005 1080 PRINTS Disease resistance protein signature 363 377 - -
Pral2758g00005 1080 PRINTS Disease resistance protein signature 654 670 - -
Pral2758g00005 1080 PRINTS Disease resistance protein signature 192 207 - -
Pral2758g00005 1080 PRINTS Disease resistance protein signature 267 281 - -
Pral2758g00005 1080 ProSiteProfiles TIR domain profile. 22 158 IPR000157 GO:0007165
Pral2758g00005 1080 Pfam NB-ARC domain 189 410 IPR002182 GO:0043531
Pral2758g00005 1080 SUPERFAMILY L domain-like 531 852 - -
Pral2758g00005 1080 Gene3D Ribonuclease Inhibitor 704 859 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2758g00005 Pral-Chr2758 29439 35869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2758g00005 24 813 WRKY Transcription Factor Family AT4G12020 30.559 3.29e-87 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2758g00005 - - pcin:129303275 1054.28