Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2756g00006 ATGGCAACTTTTACGACTTCTCCCAGCGTTCGGCAGGAAAAATATGATGTTTTTGTAAGTTTTAGAGGTCCAGACACCCGACGTAGATTTGTTAGCCATTTGAGAAAGCAGTTTCGACAAAAGGGGATAGAGGTTTATGTTGATGAGACGGCAGAGAGAGGAGATACAATATCCCCTGCACTTTCGGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCAGAAAACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATCATGGAATGCAGGCGAGACCATAGTCAGACTGTAATTCCAGTTTTCTATGATATAGACCCATCACATGTTAGGCATCAAAGAGGGTCTTATGAAGATGCATTTGTTCAGCATCATAACTGCAAAGTTGGTTCAAGGAAGTTGCAAGATTGGAGATCGGTCTTGAAAGAAACTGCAGACATATTTGGTTATCATAACTCCTCAAATTTTCAGGATGAATCTGATCTTATTGACGAAATAATCAAAGATGTATGCAAAAAGCTAGAAGGTAAAGGTAAAGACACAGTGGAGCCAATGGAACATATTGGAGTTGAGAAAAATTTGACTCCTATTGAATTATTTATGAAAGATGAATCACATGAAGTTAGAGTTTTTGGAATTTGGGGTAAAGGAGGAATAGGCAAAACCACCTTAGCTCATGCCGCATTTGATAACTTTTACCACCGATTTGATAGGTCTTGCTTCGTCGAAAATGTGAGAGAGAAATCAAAAACGATTGGAACGAATTGTTTGCTTGAAAAAATTCTCTCTGTTCTACTAGATGAAGAAAAGCTCACAATGGTTGGAATGCCTAATGTTCAAAGGAGGCTACGTAGAACAAGAGTTTTTCTAGTTCTTGATGATGTTGACACCTCCACTCAATTAAAATATCTTAGTGAGGAAAATCTTTCATTGGGACCAGGTAGCAAAGTCATCATTACAAGTAGAGATAAGCATGTTCTTATTAGTGGAGGAGCTCATGAAGTACATGAGGTGAAAGAATTAAGTAAGGAAGAATCGCTTCAACTTTTCTGCCGACATGCTTTCAAGCAAGGCCATCCCGAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGCTCATATTTGAACTCTAGAGATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAGTCTCCCCATGCAGAAATTCAAACTGTATTGAGGGTGAGCTATGATGGACTTGAGAAAACAGAAAAGAAGATATTTTTACATATTGCATTCTTCTTCAGAATAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCACCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAGTTCAAGATATACTGGAAAATAACAAGGGAACTGATATAATTGAAGGCATCGCATTGAACCCATGTGAGTTAAAAAGCAACATACGCCTGAGTGCTGACGGCTTTAGTAGAATGAGTAATTTAAAATTTCTCAAGATTGGTTTTCATTTTCAAGACAAATATCAAGTGGTTTGTCCTTTTGGTCTAGAGTCACTTCCTGATGAACTAAGATATTTTTGTTGGGAAAGTTATCCATTGAAGACTCTACCGCTTGGTTTTTGTGCAAAGAATCTTGTTGAAATCCAACTGCCTTCTAGCAATCTTGTAAAACTATGGGATGGTGCGCAGGATCTTAAGAATTTGAAAAAAATAAATCTTGCCTGCTCGAAGTTAAAGGAGTTGCCTGATTTCTCCACGGCACAAAATCTTGAAATAATGAGCCTCAGATTTTGTGTAAATTTATGCAGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGGATCTAGAGGGGTGCCTCACACTAAAGAATCTTCATGGGAATAACCATTTGAAATCTCTCAAGGAACTCAAGCTGACGCACTGCTTTGCTCTCGAGGAATTTTCGGTGTCATCAGAAGAAATGAGAAGCTTACATTTGAATAATTCAGGTATCAAAACATTAAACTTGCCATTTGGACGGTACAATAAACTTGAAGAGCTATATCTCGGTGGGAGTCTCAGGAACTTTCAAGTAAATGAGCTAAGTTGCTTGACATCTCTTAAAATATTCTCTCTTAATCGTTTTGAAGGAAGAATGGTCAAATCACAATTATCCATTCTGTTTGATGCGTGTTGTTCGTTAGAAGAATTGAGGTTGACATACTGTAAGGTTTCTGAGATCCCTGATAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACGAGGAAGCAGCGTTAAGAGTTTGCCAGATAGCATCAAGCGTCTTTCAGAGCTCAGAGAAATTGATTTGGGTAAATGCAAGAGGCTTAGGTCCTTACCAGAACTTCCATCTTCCCTTATTTGTTGTTATCTCAACGACTGCCCATCACTGAGACCTTCAGTTTCCCACTGA 2520 0.3806 MATFTTSPSVRQEKYDVFVSFRGPDTRRRFVSHLRKQFRQKGIEVYVDETAERGDTISPALSEAIERSRIALVIFSENYASSRWCLEELVKIMECRRDHSQTVIPVFYDIDPSHVRHQRGSYEDAFVQHHNCKVGSRKLQDWRSVLKETADIFGYHNSSNFQDESDLIDEIIKDVCKKLEGKGKDTVEPMEHIGVEKNLTPIELFMKDESHEVRVFGIWGKGGIGKTTLAHAAFDNFYHRFDRSCFVENVREKSKTIGTNCLLEKILSVLLDEEKLTMVGMPNVQRRLRRTRVFLVLDDVDTSTQLKYLSEENLSLGPGSKVIITSRDKHVLISGGAHEVHEVKELSKEESLQLFCRHAFKQGHPEQGYEKLSMQVIEYAKGLPLALKVLGSYLNSRDTKAWESALKKLRKSPHAEIQTVLRVSYDGLEKTEKKIFLHIAFFFRIEIHDMLQEMAEEIVREESREHPESRSRLNDAKEVQDILENNKGTDIIEGIALNPCELKSNIRLSADGFSRMSNLKFLKIGFHFQDKYQVVCPFGLESLPDELRYFCWESYPLKTLPLGFCAKNLVEIQLPSSNLVKLWDGAQDLKNLKKINLACSKLKELPDFSTAQNLEIMSLRFCVNLCSIHPSILSLPKLVSLDLEGCLTLKNLHGNNHLKSLKELKLTHCFALEEFSVSSEEMRSLHLNNSGIKTLNLPFGRYNKLEELYLGGSLRNFQVNELSCLTSLKIFSLNRFEGRMVKSQLSILFDACCSLEELRLTYCKVSEIPDNISAMSLLKILSLRGSSVKSLPDSIKRLSELREIDLGKCKRLRSLPELPSSLICCYLNDCPSLRPSVSH 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2756g00006 839 PRINTS Disease resistance protein signature 380 394 - -
Pral2756g00006 839 PRINTS Disease resistance protein signature 796 812 - -
Pral2756g00006 839 PRINTS Disease resistance protein signature 215 230 - -
Pral2756g00006 839 PRINTS Disease resistance protein signature 287 301 - -
Pral2756g00006 839 Gene3D - 186 335 IPR027417 -
Pral2756g00006 839 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral2756g00006 839 Gene3D - 345 429 IPR042197 -
Pral2756g00006 839 SMART till_3 14 152 IPR000157 GO:0007165
Pral2756g00006 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 439 IPR027417 -
Pral2756g00006 839 Gene3D Ribonuclease Inhibitor 681 838 IPR032675 -
Pral2756g00006 839 Gene3D Ribonuclease Inhibitor 444 680 IPR032675 -
Pral2756g00006 839 FunFam Disease resistance protein (TIR-NBS-LRR class) 347 429 - -
Pral2756g00006 839 SUPERFAMILY L domain-like 447 832 - -
Pral2756g00006 839 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Pral2756g00006 839 Pfam TIR domain 14 181 IPR000157 GO:0007165
Pral2756g00006 839 Pfam Leucine Rich Repeat 568 587 IPR011713 -
Pral2756g00006 839 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 676 IPR044974 GO:0006952
Pral2756g00006 839 Pfam NB-ARC domain 206 425 IPR002182 GO:0043531
Pral2756g00006 839 Gene3D - 12 185 IPR035897 -
Pral2756g00006 839 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2756g00006 Pral-Chr2756 105204 108246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2756g00006 15 804 WRKY Transcription Factor Family AT4G12020 29.787 1.22e-83 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2756g00006 - - pcin:129311144 887.1