Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2756g00005 ATGGCAACTTTTACAACTTCTTCCGAAGTTCGGCAGGAAAAATATGATGTTTTTGTTAGTTTTAGAGGTTCAGACATTAGACGTGGATTTCTTAGCCATTTGACAAAGCAATTACGACTAAAAGGGATAGATGTGTATGAGGATGAGAGGTTAGAAAGAGGAGATGAAATATCATCTGCACTTTTGGAAGCAATAGAAAGATCAAGAATTGCGTTGGTGATATTCTCAAAAGACTATGCTTCTTCAAGGTGGTGCATAGAAGAGCTAGAGAAAATCATGGAATGCAAGCAAGTCAATAATCAGATTGTAATCCCAATTTTCTATAATATAGATCCATCACACGTTAGGCATCAGGAAGGATCTTATGCAGATTCATTTGCTCAGCATGAGCAGAAGTTTAAAGACGACTTGTTGCGAGTTTGGAGATCTGTCTTGAAAGAAACTGCAAACTTATCTGGTTATCATCATTCCTCAAATTTTCAAAATGAATCTGATCTTATTGATGGAATAATTAAAGATGTATCAAAAAAGCTAGAGGGTAAAGACACAATTGAGCCAAAGGGCCTCATTGGAATTGAGGAAAATGTGGCTACTATTGAATCATTCATGAAAGATGACTCACAAAAAATCAGAGTTCTTGGAATTTGGGGTAAGGGAGGGATAGGTAAAACAACCTTGGCTCGTGCCACATTTGATAAGTTTTCCCACCAATTTGATAGTTCTTGCTTTGCAGCAAATGTGAGAGAGGAATCAAAAAAGATTGGATTGACTCGTTTGCTTAAAGAAATTCTCTTAGTACTACTAAAAGATGAAAGTATTCTCAAAATCGATGGAATGCCTAATATTCAAAGGAGGCTACATCGAACAAGAGTTCTTCTAGTGCTTGATGACGTAGACCACCCCAGTCAATTACAATATCTTATTGACGAAAATCTTTTGTTGGGACCAAGTAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGAGTTCATGAAGTACATGAGGTGAAAGAATTAAGCAAGGACGAATCGCTTCACCTTTTTTGCCGGCATGCTTTCAAGGAAGGCCATCCCAAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGTTCATATTTGAACACTAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAATATCCAAATAGGGAAATTCAAACTGTGTTGAGGGTGAGCTACGATGGACTTGATACATCAGAAAAGGGGATATTTTTAAATGTTGCATTCTTCTTCAGGGGAGAAAAGAAAGAAGATATTATGAGGTTGCTCGATGCTTGTGATGATGACCTCTACGTGGACATTGGAATAGATAGGCTTCTGGATAAAGCACTCATAACCATTTCAAGTCACAATAGAGTAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCCAGAGAGTATCCTGAAAGTCGAAGTCGATTAAATGATACAAAAGAAGTTCAAGATATATTGGAAAATAACAAGGGAACTGATATAATTGAAGGCATTGCATTGAACCCAGATGAGTTAAGAAGTGACATACACTTGAGTGTTGACGCTTTTAGCAGAATGAAAGAATTGAGGTTGAGATACTGTGAGGTTTCTGAGATCCCTGACAATATTAGTTCCATGTCATTGTTGAAGATTCTATCACTAAGAGGAAGCAGCGTTAAAAGTTTGCCAGATAGCATCAAGCATCTTTCAGAACTTAGAGAAATTGATTTGGGTGGATGCAAGAGGCCTAGGTCCTTACCAGAACTTCAACCTTCCCCTATTTATTGTTATCTCAACGAATACCAATCACTGGAGACCTTCAGTTTCCTACTGATGCAATCAATACATAACTCTAGTGAGTTTAGAGTTTGTTATCCTGGAAGCACAATCCCACGGGGCTTCAAATATTCTCAGACTGCTAAGAGTTCTATTAGTATTGAACTTGCACCAGCTTCATTTGACCATTTATTGGGTTTCGCTTTTTATTGTATTGTTTCCGCATTGCCAAGAGACTATTTACCACCAGTTGGCAGAAAATTCCACTTTGAAGAAGAAAAGATCTATTACAGGGTTGACGACAAACTCATTTACCTCGAGTATCTGAGCACAGATCATGTTTTGTTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGCGCCACTTACAAAAATACAGGAGAAAATGGAATTAAGGCTAGAGACGGATGCTGTTACCGGCAGGCAGTACCAGCCAGCACCCTAATGCTGAAGTGTCCCAACATCAGCCAGCACGTGATTCCGTTAGGAGAAGCACTCGTGTGTGCCAAAGGACAGGGAACTTGA 2433 0.3851 MATFTTSSEVRQEKYDVFVSFRGSDIRRGFLSHLTKQLRLKGIDVYEDERLERGDEISSALLEAIERSRIALVIFSKDYASSRWCIEELEKIMECKQVNNQIVIPIFYNIDPSHVRHQEGSYADSFAQHEQKFKDDLLRVWRSVLKETANLSGYHHSSNFQNESDLIDGIIKDVSKKLEGKDTIEPKGLIGIEENVATIESFMKDDSQKIRVLGIWGKGGIGKTTLARATFDKFSHQFDSSCFAANVREESKKIGLTRLLKEILLVLLKDESILKIDGMPNIQRRLHRTRVLLVLDDVDHPSQLQYLIDENLLLGPSSKVIITSRDRHVLISGGVHEVHEVKELSKDESLHLFCRHAFKEGHPKQGYEKLSMQVIEYAKGLPLALKVLGSYLNTRNTKAWESALKKLRKYPNREIQTVLRVSYDGLDTSEKGIFLNVAFFFRGEKKEDIMRLLDACDDDLYVDIGIDRLLDKALITISSHNRVEIHDMLQEMAEEIVREESREYPESRSRLNDTKEVQDILENNKGTDIIEGIALNPDELRSDIHLSVDAFSRMKELRLRYCEVSEIPDNISSMSLLKILSLRGSSVKSLPDSIKHLSELREIDLGGCKRPRSLPELQPSPIYCYLNEYQSLETFSFLLMQSIHNSSEFRVCYPGSTIPRGFKYSQTAKSSISIELAPASFDHLLGFAFYCIVSALPRDYLPPVGRKFHFEEEKIYYRVDDKLIYLEYLSTDHVLLWYDPVDRMLKENQRRRFDEGATYKNTGENGIKARDGCCYRQAVPASTLMLKCPNISQHVIPLGEALVCAKGQGT 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2756g00005 810 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral2756g00005 810 Gene3D - 182 336 IPR027417 -
Pral2756g00005 810 SUPERFAMILY L domain-like 485 617 - -
Pral2756g00005 810 Gene3D - 12 181 IPR035897 -
Pral2756g00005 810 Pfam TIR domain 14 185 IPR000157 GO:0007165
Pral2756g00005 810 PRINTS Disease resistance protein signature 378 392 - -
Pral2756g00005 810 PRINTS Disease resistance protein signature 595 611 - -
Pral2756g00005 810 PRINTS Disease resistance protein signature 285 299 - -
Pral2756g00005 810 PRINTS Disease resistance protein signature 212 227 - -
Pral2756g00005 810 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Pral2756g00005 810 SMART till_3 14 151 IPR000157 GO:0007165
Pral2756g00005 810 SUPERFAMILY "Winged helix" DNA-binding domain 414 504 IPR036390 -
Pral2756g00005 810 Pfam C-JID domain 653 749 IPR045344 -
Pral2756g00005 810 Gene3D - 343 427 IPR042197 -
Pral2756g00005 810 Gene3D Ribonuclease Inhibitor 474 662 IPR032675 -
Pral2756g00005 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 435 IPR027417 -
Pral2756g00005 810 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 180 - -
Pral2756g00005 810 FunFam Disease resistance protein (TIR-NBS-LRR class) 345 427 - -
Pral2756g00005 810 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 617 IPR044974 GO:0006952
Pral2756g00005 810 Pfam NB-ARC domain 199 419 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2756g00005 Pral-Chr2756 80592 84244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2756g00005 15 594 WRKY Transcription Factor Family AT4G12020 30.523 2.47e-68 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2756g00005 - - pcin:129311144 675.241