Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2756g00004 ATGGCAACTTTTACGACTTCTCCCAGCGTTCGGCAGGAAAAATACGATGTTTTTGTAAGTTTTAGAGGTCCAGACACCAGACGTAGATTTGTTAGCCATTTGAGAAAGCAGTTTCGACAAAAGGGGATAGAGGTTTATGTTGATGAGACGGCAGAGAGAGGAGATACAATATCACCTGCACTTTCGGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCAGAAAACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATCATGGAATGCAGGCGAGACCATAGCCAGACTGTAATTCCAGTTTTCTATGATATAGATCCATCACATGTTAGGCATCAAAAAGGATCTTATGAAGATGCATTTGTTCAGCATCGTAACTGCAAAGTTGATTCAAGGAAGTTGCAAGATTGGAGATCAGTCTTGAAAGAAACTGCAGACATATTTGGTTATCATAATTCCTCAAATTTTCAGGATGAATCTGATCTTATTGATGAAATAATCAAAGAGGTATGCAAAAAGCTAGAAGGTAAAGGTAAAGACACAGTGGAGCCAATGGAACATATTGGAGTTGAGAAAAATTTGACTCCTATTGAATTATTTATGAAAGATGAATCACATGAAGTTAGAGTTTTTGGAATTTGGGGTAAAGGAGGAATAGGCAAAACCACCTTAGCTCATGCCGCATTTGATAACTTTTACCACCGATTTGATAGGTCTTGCTTTGTCGAAAATGTGAGAGAGAAATCAAAAACGATTGGAACGAATTGTTTGCTTGAAAAAATTCTCTCTGTTCTACTAGACGAAGAAAAGCTCACAATGGTTGGAATGCCTAATGTTCAAAGGAGGCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATGATGTAGACACCTCCAGTCAATTACAATATCTTATTGACCAAAATATTTCCTTGGGACCAAGCAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGAGTTCATGAAGTACATGAGGTGAAAGAATTAAGCAAGGAAGAATCGCTTCAACTTTTCTGCCAACATGCTTTCAAGCAAGGCCATCCGAAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGCTCATATTTGAACTCTAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAGTATCCCCATGCAGAAATTCAAACTGTATTGAGGGTGAGCTATGATGGACTTGAGAAAACAGAAAAGAGGATATTTCTACATATTGCATTCTTCTTCAGGGGAGGAAAGAAAGAAGATATTATTAGGGTACTAGATTCTTGTAACGATGACCTCTATGTGGATATTGGAATAGATAGGCTTCTAGATAAAGCACTCATAACTAGTTCAAGTGACAGCAGAATAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCACCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAGTTCAAGATATATTGGAAAATAATAAGGGAACTGATATAATTGAAGGCATCGCATTGAACCCATACGAACATCAAGTGCTTTGTCCTTTTGGTCTAGAGTCACTTCCTGATAAACTAAGATATTTTTGTTGGAAACGTTGTCCATTGGAGACTCTACCGCTTGGTTTATGTGCAAAGAATCTTGTTGAAATCCAAATGCCTTGTAGCAAAGTCGTAAAACTATGGGACGGTGTGCAGGATCTTACGAATTTGAAGAAAATAAATCTTGCCCGCTCGAAGTTAAAGGAGTTGCCTGATTTCTCCACGGCACAAAATCTTGAAATAGTGAACCTCAGCTATTGTGGAAGTTTATGCAGTATTCATCCATCAATCTTCTCTCTTCCTAAACTTGTTTCTTTGAATCTACAGGGGTGCAAGATATTAAAGAGTCTTCACAGGGATAACCATGTGAAATCTCTCAAGGAAGTCACACTGACGTTCTGCTATGCTCCCGAGGAATTTTTGTTGTCATCAGAAGAAATGAGAAGGCATCTCACGAGCGTTGAAGTAAATGCGCTAAGTTGCTTGACATCTCTTAAAGTATTCTCTCTTAATGGTTTTGAAGGAGAAATAGACAAATCAAAATTAGTCATTCTGTTTGATGCCTGGCGTTCGTTAGAAGAACTAAGGTTGATGGGCTGTGGGGTTTCTGAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACGAGGAAGCAGTGTTAAGAGTTTGCCAGATAGCATCAAGCATCTTTCAGAGCTCAGAAAAATTGATTTGGGTAATTGCAAGAGGCTTAGATCCTTACCAGAACTTCCACCTTCCCTTACTCATTGTTGTCTCAACGAATGCCAATCACTAGAGACCTTCGGTTTCCCACTAACGCGAGCAATACATAACTCTAGTGAGGTTAGAGTTTGTTATCCCGGAAGCACAATCCCAGGGGGCTTCAAATATTCTCAGACCGCTAAGAGGTCCATTAGTATTGAGCTTGCACCAACTTCTTCTGACCATTTATTGGGTTTCGCTTCTTGTTGTATTCTTTCCTCATCGACGATACCAAGAGTTCACAGAAAAGTCCACCTTGAAGATGAAAAGATCTATTACAGTAGTGACAGCAACATAATCCTTGAGGATTGGAGTACAGATCATGTTTTGTTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGCGCCACTTACAAGTTTGCATGTGAATTCTTCTACGAAGATTTCTCCGGTCGTCTTGCGGATGAATTTAATGACGGGATAAAAAGTTGTGCAATTTGGCTAATATACGCATCAGAATTACAGGAGAAAATGGAATTAAGGCTAGAGACAGATGCTGTTACAGGCAGTACCAGCCAGCACCCTAATGCTGAAGTGTCCCAACATCAGCCAGCACATTATTTCGTTAGGAGAAGCACTCGTGTGCGCCAGAAGACAGGGAACTTGACCATGATGCCGTACTCTTTGAGAACGAAGAGAGGCCGAAATGAGCGCACGGCCCCAAAGGACAACAAACGAATCGCTCGATAA 3150 0.3975 MATFTTSPSVRQEKYDVFVSFRGPDTRRRFVSHLRKQFRQKGIEVYVDETAERGDTISPALSEAIERSRIALVIFSENYASSRWCLEELVKIMECRRDHSQTVIPVFYDIDPSHVRHQKGSYEDAFVQHRNCKVDSRKLQDWRSVLKETADIFGYHNSSNFQDESDLIDEIIKEVCKKLEGKGKDTVEPMEHIGVEKNLTPIELFMKDESHEVRVFGIWGKGGIGKTTLAHAAFDNFYHRFDRSCFVENVREKSKTIGTNCLLEKILSVLLDEEKLTMVGMPNVQRRLRRTRVLLVLDDVDTSSQLQYLIDQNISLGPSSKVIITSRDRHVLISGGVHEVHEVKELSKEESLQLFCQHAFKQGHPKQGYEKLSMQVIEYAKGLPLALKVLGSYLNSRNTKAWESALKKLRKYPHAEIQTVLRVSYDGLEKTEKRIFLHIAFFFRGGKKEDIIRVLDSCNDDLYVDIGIDRLLDKALITSSSDSRIEIHDMLQEMAEEIVREESREHPESRSRLNDAKEVQDILENNKGTDIIEGIALNPYEHQVLCPFGLESLPDKLRYFCWKRCPLETLPLGLCAKNLVEIQMPCSKVVKLWDGVQDLTNLKKINLARSKLKELPDFSTAQNLEIVNLSYCGSLCSIHPSIFSLPKLVSLNLQGCKILKSLHRDNHVKSLKEVTLTFCYAPEEFLLSSEEMRRHLTSVEVNALSCLTSLKVFSLNGFEGEIDKSKLVILFDAWRSLEELRLMGCGVSEIPDNISAMSLLKILSLRGSSVKSLPDSIKHLSELRKIDLGNCKRLRSLPELPPSLTHCCLNECQSLETFGFPLTRAIHNSSEVRVCYPGSTIPGGFKYSQTAKRSISIELAPTSSDHLLGFASCCILSSSTIPRVHRKVHLEDEKIYYSSDSNIILEDWSTDHVLLWYDPVDRMLKENQRRRFDEGATYKFACEFFYEDFSGRLADEFNDGIKSCAIWLIYASELQEKMELRLETDAVTGSTSQHPNAEVSQHQPAHYFVRRSTRVRQKTGNLTMMPYSLRTKRGRNERTAPKDNKRIAR 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2756g00004 1049 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Pral2756g00004 1049 PRINTS Disease resistance protein signature 215 230 - -
Pral2756g00004 1049 PRINTS Disease resistance protein signature 380 394 - -
Pral2756g00004 1049 PRINTS Disease resistance protein signature 778 794 - -
Pral2756g00004 1049 PRINTS Disease resistance protein signature 287 301 - -
Pral2756g00004 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 708 IPR044974 GO:0006952
Pral2756g00004 1049 Pfam Leucine Rich Repeat 578 597 IPR011713 -
Pral2756g00004 1049 Gene3D - 186 336 IPR027417 -
Pral2756g00004 1049 Gene3D Ribonuclease Inhibitor 532 687 IPR032675 -
Pral2756g00004 1049 Pfam TIR domain 14 181 IPR000157 GO:0007165
Pral2756g00004 1049 MobiDBLite consensus disorder prediction 986 1000 - -
Pral2756g00004 1049 Gene3D - 12 185 IPR035897 -
Pral2756g00004 1049 MobiDBLite consensus disorder prediction 1031 1049 - -
Pral2756g00004 1049 Gene3D - 345 429 IPR042197 -
Pral2756g00004 1049 SMART till_3 14 152 IPR000157 GO:0007165
Pral2756g00004 1049 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
Pral2756g00004 1049 Pfam NB-ARC domain 206 425 IPR002182 GO:0043531
Pral2756g00004 1049 MobiDBLite consensus disorder prediction 1028 1049 - -
Pral2756g00004 1049 FunFam Disease resistance protein (TIR-NBS-LRR class) 347 429 - -
Pral2756g00004 1049 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral2756g00004 1049 MobiDBLite consensus disorder prediction 986 1011 - -
Pral2756g00004 1049 SUPERFAMILY L domain-like 487 817 - -
Pral2756g00004 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 439 IPR027417 -
Pral2756g00004 1049 Gene3D Ribonuclease Inhibitor 688 832 IPR032675 -
Pral2756g00004 1049 Pfam C-JID domain 836 974 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2756g00004 Pral-Chr2756 61937 65578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2756g00004 15 821 WRKY Transcription Factor Family AT4G12020 28.454 1.00e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2756g00004 - - pcin:129311144 964.526