Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2756g00003 ATGGCAACTTTTACGACTTCTTCCAAAGTTCAGCAGGAAAAATATGATGTTTTTGTTAGTTTTAGAGGTTCAGACATCAGACGTGGATTTCTTAGCCATTTGACAAAGCTGTTACGACTAAAGAGCATAGGTGTGTATGAGGATGAGAGGTTAGAAAGAGGAGATGAAATATCATCTGCACTTTTGAAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCAAAAGACTATGCTTCTTCAAGATGGTGCTTAGAAGAGCTAGAGAAAATCATGGAATGCAAGCGAGCCAATAATCAGATTGTAATTCCAATTTTCTATAATGTGGAGCCATCACACGTTAGGCATCAAGAAGAATCCTATGCAAATGCATTTGCTCACCATAAGCAGAAATTCAAAGATGACTTGTTGCAAGTTTGGAGATCTGTCTTAAAAGAAACTGCAAACTTGTCTGGTTATCATCATTCCTCAAATTTTCAAAATGAATCCGATCTTATTGATGGAATAATCAAAGATGTATCAAAAAAGCTAGAAGGTAAAGACACAATTGAGCCAAAGCGTCTTATTGGAATTGAAGAAAATTTGGCTACTATTGAATCATTTATGAAAGATGACTCACAAAAAGTTGGAGTTCTGGGAATTTGGGGTAAGGGAGGGGTAGGTAAAACAGCCTTGGCTCGTGCCACATTTGATAAGTTTTCCCACCAATTTGATAGTTCTTGCTTTGCAGAAAATATCAGAGAGGAATCAAAAAAGATTGGATTGACTTGTTTACTTGAAAAAATTCTCATTGTTCTACTAAATGAAGAAAACCTCACAATAGTTGGAATGCCTAATATTCAAAGGAGGCTACGTCAAACAAGAGTTCTTCTAGTGCTTGATGATGTAGACACTCCCAGTCAATTACAATATCTTGTTGACGAAAATCTTTCATTGGGACCAAGCAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTCTTAGTGGAGGAGTTCATGAAGTACATGAGGTGAAGGAATTAAGCAAGGAAGAATCGCTTCAACTTTTCTGCCGACATGCTTTTAAGCAATGCCATCCCAAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGTTCATATTTGAGCTCTAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAGAATCCAAATAGGGAAATTCAAGCTGCATTGAGGGTGAGCTATGATGGACTTGATACACTAGAAAAGGAGATATTTTTAAATATTGCATTCTTCTTCAGGGGAGGAAAGAAAGAAGATATCATGAAGGTGCTAGATGCTTGTGATGATGACCTCTACATGGATATTGGAATAGATAGGCTTCTAGATAAAGCACTTATAACTATTTCAAGTGATAGTAGAGTAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCACCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAGTTCAAGATATACTGGAAAATAACAAGGGAACTGATATAATTGAAGGCATTGCATTGAACCCACATGAGTTAAAAAGTGACATACACTTGAGTGCTGACGCTTTTAGAAGAATGAGTAATTTAACATTTCTCAAGATTGGTCCTAATTTTGGAGGCAAATATAAAGTGCTTTTTCCTTTTGGTTTGGAGTCACTTCCTAATAAACTAAGATATTTTTGTTGGAAAGATTATCCATTGGAGACTCTACCGCAAGGTTTTTGTGCAGACAAACTTGTTGAAATCCAAATGCCTTGTAGCAAAGTTGTAAAACTATGGGATGGTGTGCAGGATTGTATGAATTTGAAGATACTAAATCTTGCTTGTTCGCGGGAGTTAAGGGAGTTGCCTGATTTCTCCATGGCACAAAATCTTGAAATAATGGACCTCAGTTATTGTAGAAGTTTATGTAGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGAATCTAGAGGGGTGCATTGAACTAAAGAATCTTCATGGGGATAACCATTTGAAACCTCTCAAGGAACTCAAGCTAGCATTGTGCCCTGCTCTCGAGGAATTTTTGTTATCATCAGAAGAAATGAGAAGTTTACATTTGAATTGTACAAGTATCAAAACATTAAACTTGCCAGTTGGACGGTTTAATAAACTTGAAGAGCTATATCTCAGTGGACTTCTCAGGAGCTTTCAAGTAAAAGAGCTAAGTAGCTTGACATCTCTTAAAGTATTCTCTCTTGGTGGTTTTAAAGGCAAAATAGACAAATCAGAATTAGTCATTTTGTTTGATGCGTGGCGTTCTTTAGAAGAACTGTATTTGACGTACTGCATGATTTGTGAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACGAGAAAGCAGTGTTAAGAGTTTGCCAAATAGCATCAAGCATCTTTCAGAGCTCAGAGAAATTGATTTGCGTCAATGCAAGAGGCTTAGGTCCTTACCAGAACTTCCACCTTCCCTTGCTGACTGTTATCTCCACGACTGCCAATCACTAGAGACCTTTGGTTTCCCACTGATGCGAGCAATACATAACTCTAGTGAGGTTAGAGTTTGTTATCCCGGAAGCATAATCCCAAAGGGCTTCAAACATTCTCAGACCGCTAAGAGGTCCATTACTATTGAGCTTGCACCAGCTTCTTCTGACCATTTATTGGGTTTCGCTTCTTGTTGTATTTTTTCAGGATGGAAATTCGACTTTCACCAACAAGTTGACAGAAAATTCCACTTTGAGGATGAAATGATCTATTACAGGGGTGACGACAAACTCATGTACCTTGAGGATCCAAGGATAGATCATATTTTTTTATGGTATAATCCAGGGGATCGCATGCTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGTGCCACTCGCAAGTTTACATGTGAATTCGCCATTGGAGATTCCCCTCATAGTTTGCTTGGATATGATCGCGGGATAAAAGGGTGCGGAATTTGGCCAATATATGCATCAGAAATACAGGAGAAAATGGAATTAAGACTGGAGACGAATGCTGCTACAGCCAATACCTGGCAGCACCCTAATGCTGAAGTGTCCCAACATCAGCCAGCACGTGATTCCGTTAGAAGAAGCACTCGTGTGCTCCAAAGGACAAGGAACTTGACCACAATGCTTTACTCTTTGAGAACCAAGAGAGGCTGA 3282 0.383 MATFTTSSKVQQEKYDVFVSFRGSDIRRGFLSHLTKLLRLKSIGVYEDERLERGDEISSALLKAIERSRIALVIFSKDYASSRWCLEELEKIMECKRANNQIVIPIFYNVEPSHVRHQEESYANAFAHHKQKFKDDLLQVWRSVLKETANLSGYHHSSNFQNESDLIDGIIKDVSKKLEGKDTIEPKRLIGIEENLATIESFMKDDSQKVGVLGIWGKGGVGKTALARATFDKFSHQFDSSCFAENIREESKKIGLTCLLEKILIVLLNEENLTIVGMPNIQRRLRQTRVLLVLDDVDTPSQLQYLVDENLSLGPSSKVIITSRDRHVLLSGGVHEVHEVKELSKEESLQLFCRHAFKQCHPKQGYEKLSMQVIEYAKGLPLALKVLGSYLSSRNTKAWESALKKLRKNPNREIQAALRVSYDGLDTLEKEIFLNIAFFFRGGKKEDIMKVLDACDDDLYMDIGIDRLLDKALITISSDSRVEIHDMLQEMAEEIVREESREHPESRSRLNDAKEVQDILENNKGTDIIEGIALNPHELKSDIHLSADAFRRMSNLTFLKIGPNFGGKYKVLFPFGLESLPNKLRYFCWKDYPLETLPQGFCADKLVEIQMPCSKVVKLWDGVQDCMNLKILNLACSRELRELPDFSMAQNLEIMDLSYCRSLCSIHPSILSLPKLVSLNLEGCIELKNLHGDNHLKPLKELKLALCPALEEFLLSSEEMRSLHLNCTSIKTLNLPVGRFNKLEELYLSGLLRSFQVKELSSLTSLKVFSLGGFKGKIDKSELVILFDAWRSLEELYLTYCMICEIPDNISAMSLLKILSLRESSVKSLPNSIKHLSELREIDLRQCKRLRSLPELPPSLADCYLHDCQSLETFGFPLMRAIHNSSEVRVCYPGSIIPKGFKHSQTAKRSITIELAPASSDHLLGFASCCIFSGWKFDFHQQVDRKFHFEDEMIYYRGDDKLMYLEDPRIDHIFLWYNPGDRMLKENQRRRFDEGATRKFTCEFAIGDSPHSLLGYDRGIKGCGIWPIYASEIQEKMELRLETNAATANTWQHPNAEVSQHQPARDSVRRSTRVLQRTRNLTTMLYSLRTKRG 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2756g00003 1093 Pfam NB-ARC domain 199 423 IPR002182 GO:0043531
Pral2756g00003 1093 SUPERFAMILY L domain-like 485 872 - -
Pral2756g00003 1093 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral2756g00003 1093 Gene3D - 342 426 IPR042197 -
Pral2756g00003 1093 SMART till_3 14 151 IPR000157 GO:0007165
Pral2756g00003 1093 MobiDBLite consensus disorder prediction 1050 1073 - -
Pral2756g00003 1093 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 180 - -
Pral2756g00003 1093 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Pral2756g00003 1093 Gene3D - 181 335 IPR027417 -
Pral2756g00003 1093 Pfam C-JID domain 893 1033 IPR045344 -
Pral2756g00003 1093 PRINTS Disease resistance protein signature 284 298 - -
Pral2756g00003 1093 PRINTS Disease resistance protein signature 212 227 - -
Pral2756g00003 1093 PRINTS Disease resistance protein signature 834 850 - -
Pral2756g00003 1093 PRINTS Disease resistance protein signature 377 391 - -
Pral2756g00003 1093 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 714 IPR044974 GO:0006952
Pral2756g00003 1093 Pfam Leucine Rich Repeat 605 624 IPR011713 -
Pral2756g00003 1093 Gene3D - 11 180 IPR035897 -
Pral2756g00003 1093 Pfam TIR domain 14 186 IPR000157 GO:0007165
Pral2756g00003 1093 Gene3D Ribonuclease Inhibitor 520 713 IPR032675 -
Pral2756g00003 1093 Gene3D Ribonuclease Inhibitor 714 890 IPR032675 -
Pral2756g00003 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 435 IPR027417 -
Pral2756g00003 1093 FunFam Disease resistance protein (TIR-NBS-LRR class) 344 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2756g00003 Pral-Chr2756 42498 46170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2756g00003 15 842 WRKY Transcription Factor Family AT4G12020 30.961 1.85e-93 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2756g00003 - - pcin:129311144 1160.21