Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2756g00002 ATGGCGACTTTTACGACTTCTCCCAGCGTTCCGCAGGAAAAGCATGATGTTTTTGTCAGCTTTAGAGGTCCAGACACCAGACGTGGATTTCTTAGCCATTTGAGAAAGCAGTTTCAACAAAAGGGGATAAAGGTTTATGTTGATGAGACGGCAGAGAGAGGAGATACAATATCACCTGCACTTTCAGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCTGAAAACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATCATGCAATGCAGGCAAGACCATAGTCAGATTGTAATTCCAGTTTTCTATGATATAGACCCATCAAATGTTAGGCGTCAAAAAGGATCGTATGAAGGTGCATTTGTTCAGCATCGTAACTGCAGAGTTGATTCAAGGAAGTTGCAAGATTGGAGATCGGTCTTAAAAGAAACTGCAGACATATTTGGTTATCATAATTCCTCAAATTTTCGGGATGAAGCTGACCTTATTGATGAAATAATCAAAGATGCATGCAAAAAGCTAGAAGGTAAAGGTAAAGACACAGTGGAGCCAAAGGACCATATTGGAATTGAGAAAAATTTGACTCCTATTGAATTATTTATGGAAGATGAATCACATGAAGTTAGAGTTTTTGGAATTTGGGGTAAAGGAGGAATAGGCAAAACCACCTTAGCTCATGCCACATTTGGTAACTTTTACCACCAATTTGATAGGTCTTACTTTGCTGAAAATGTGAGAGAGAAATCAAAAAAGATTGGAATGGATTGTTTGCTTGAAGAAATTCTCTCTGTTCTACTAGATGAAGAAAAGCCCCGAATGGTTGGAAAGCCTAATATTCAAAGGAGGCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATGATGTAGACACCTCCAGTCAATTACAATATCTTATTGATGAAAATCTTTCATTGGGACCAAGTAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGAGTTCATGAAGTACATGAGGTGAAAGAATTAGGCAAGGAAGAATCGCTTCAACTTTTCTGCCGACATGCTTTCAAGCAAGGCCATCCGAAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGATAGGCTTGTAGATAAAGCACTCATAACTATTTCAAGAGATGATAGAGTGGAAATTCATGATCTACTGCAAGAAATGGCTAAAGAAATAGTTCGTGAGGAATCTAGAGAGCACCCTGAAAGTCGAAGTCGATTACATGATGCCGAAGAAGTTCGAGATGTATTGGAAAATAACAAGGGAACTAATGCAATTGAAGGTATCGCGTTGAACCCAGAAGAGTTAGAAAGCGACATACATTTGAGTGCTGAGGCTTTCAAAAAAATGAGTAATTTAAGATTTCTCAAGATTTATTCTAGTTTTAACCAATCAGTGAAACTTCCTTTTGGTCTGGAGTCGCTCCCTAATAAACTAAGATATTTTTATTGGGACCGTTATCCTTTGAAGACTCTGCCACTGGGTTTTTGTACAGACAAACTTGTTGAAATCCATATGCCTGTTAACCGAGTCATAAAACTATGGGATGGTGTGCAGGATCTCATGAATTTGAAGATAATAAGTCTTGTCCTTTCGGTGAACTTAAAGGAGTTGCCTGACTTCTCCGGGGCACAAAATCTTGAAATGATGGACCTCGAATTTTGTCAAAGTTTATGCAGTATTCATCCATCAATCTTCTCTCTTCCTAAACTTGTTTCTTTGAATCTAATGGGGTGCTACAAACTAAAGAATCTTCACACGGATAACCATTTGAAATCTCTCAAGGAACTCCAGCTGACATGCTGCTTTGCTCTTGAGGAATTTTTGTTGTCATCAGAAGAAATGAGAAGTTTACATTTGGCATCTACAGGTATCAAAACATTAAACTTGCCAGTTGGACGGTTCAATAAACTTGAAGAGCTATATCTTGGTGGGCATCTCAGGAGCTTTCAAGTAAATGAGCTAAGTTGCTTAACATCTCTTAAAATATTCTCTCTTGATCGTCTTAGAGGAAGAATAGGCAAATCAAAATTAGTCATTCTGTTTGATGCCTGGTGCTCGTTAGAAGAATTGACGTTGAGATACTGTGGGGTTTCTGAGATCCCTGACAATATCAATGCCATGTCATTATTGAAGATTCTATCACTACGAGGAAGTAGCGTTGAGAGTTTGCCAGATAGCATCAAGCATCTTTCAGGGCTCAGAGAAATTGATTTGGGTCAATGCAAGAGGCTTAGGTCCTTACCAGAACTTCCACCTTCCCTTGCTTATTGTTATCTCGACGAATGCCAATCACTGGAGACCTTCGATTTCCCACTGATGCGAGCAATACATAACTTTAGCGAGGTTAGAGTTTGTTATCCCGGAAGCACAATCCCAGGGGGCTTCAAATATTCTCTGACTACTGCTAAGAGTTCTATTAGTATTGAGCTTGCACCAGCTTCTTCTGACCATTTATTGGGTTTTGCTTCTTATTGTATTCTTTCCACACTGTGTCCCAAATATTTCCTAGGATTCAACGGCAAATTCCACTTTGAAGATGAAAAGATCTATTGGGATGACAACAAATTCAATCGCTTTGAGCAGCTGAGTACAGATCATGTTTTCTTACGGTATGATCCAATGGATCACATGGTGAAGGAAAACCAAAGAAGGCGATTTGATGAGAATGCCACTTGCAAGTTTAGATGTAAATTTAATGCAGATTGCTTTTATCCTTCGCTCAAATATGATCCCGACATAAAAGGGTGCGGAATTTGGCCAATATATGCATCAGAAATACAAGAAAAAATGGAATTAAGACTGGAGACGAATGCTGTTACAGGCAGTACCAGGCAGTACCTTAATGTTGAGTACTCGTGTGCGCCAGAGGACAGGGAACTTGACCACGATGCCTTACTCTTTGAGAACCAAGAGAGGCCGAAATGA 2985 0.3916 MATFTTSPSVPQEKHDVFVSFRGPDTRRGFLSHLRKQFQQKGIKVYVDETAERGDTISPALSEAIERSRIALVIFSENYASSRWCLEELVKIMQCRQDHSQIVIPVFYDIDPSNVRRQKGSYEGAFVQHRNCRVDSRKLQDWRSVLKETADIFGYHNSSNFRDEADLIDEIIKDACKKLEGKGKDTVEPKDHIGIEKNLTPIELFMEDESHEVRVFGIWGKGGIGKTTLAHATFGNFYHQFDRSYFAENVREKSKKIGMDCLLEEILSVLLDEEKPRMVGKPNIQRRLRRTRVLLVLDDVDTSSQLQYLIDENLSLGPSSKVIITSRDRHVLISGGVHEVHEVKELGKEESLQLFCRHAFKQGHPKQGYEKLSMQVIEYAKDRLVDKALITISRDDRVEIHDLLQEMAKEIVREESREHPESRSRLHDAEEVRDVLENNKGTNAIEGIALNPEELESDIHLSAEAFKKMSNLRFLKIYSSFNQSVKLPFGLESLPNKLRYFYWDRYPLKTLPLGFCTDKLVEIHMPVNRVIKLWDGVQDLMNLKIISLVLSVNLKELPDFSGAQNLEMMDLEFCQSLCSIHPSIFSLPKLVSLNLMGCYKLKNLHTDNHLKSLKELQLTCCFALEEFLLSSEEMRSLHLASTGIKTLNLPVGRFNKLEELYLGGHLRSFQVNELSCLTSLKIFSLDRLRGRIGKSKLVILFDAWCSLEELTLRYCGVSEIPDNINAMSLLKILSLRGSSVESLPDSIKHLSGLREIDLGQCKRLRSLPELPPSLAYCYLDECQSLETFDFPLMRAIHNFSEVRVCYPGSTIPGGFKYSLTTAKSSISIELAPASSDHLLGFASYCILSTLCPKYFLGFNGKFHFEDEKIYWDDNKFNRFEQLSTDHVFLRYDPMDHMVKENQRRRFDENATCKFRCKFNADCFYPSLKYDPDIKGCGIWPIYASEIQEKMELRLETNAVTGSTRQYLNVEYSCAPEDRELDHDALLFENQERPK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2756g00002 994 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral2756g00002 994 SUPERFAMILY L domain-like 400 790 - -
Pral2756g00002 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 382 IPR027417 -
Pral2756g00002 994 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
Pral2756g00002 994 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 381 IPR044974 GO:0006952
Pral2756g00002 994 SMART till_3 14 152 IPR000157 GO:0007165
Pral2756g00002 994 Gene3D - 12 181 IPR035897 -
Pral2756g00002 994 Gene3D Ribonuclease Inhibitor 394 631 IPR032675 -
Pral2756g00002 994 Gene3D - 182 339 IPR027417 -
Pral2756g00002 994 Pfam C-JID domain 806 946 IPR045344 -
Pral2756g00002 994 Pfam NB-ARC domain 206 378 IPR002182 GO:0043531
Pral2756g00002 994 Pfam TIR domain 14 181 IPR000157 GO:0007165
Pral2756g00002 994 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Pral2756g00002 994 PRINTS Disease resistance protein signature 287 301 - -
Pral2756g00002 994 PRINTS Disease resistance protein signature 215 230 - -
Pral2756g00002 994 PRINTS Disease resistance protein signature 748 764 - -
Pral2756g00002 994 Gene3D Ribonuclease Inhibitor 632 830 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2756g00002 Pral-Chr2756 14388 18033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2756g00002 384 756 WRKY Transcription Factor Family AT4G12020 36.434 7.49e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2756g00002 - - pcin:129311144 571.237