Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2756g00001 TTTCGACAAAAGGGCATAGAGGTTTATGTTGATGAGACGGCAGAGAGAGGAGATACAATATCACCTGCACTTTCAGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCTGAAAACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATCATGCAATGCAGGCAAGACCATAGTCAGATTGTAATTCCAGTTTTCTATGATATAGACCCATCAAATGTTAGGCGTCAAAAAGGATCGTATGAAGGTGCATTTGTTCAGCATCGTAACTGCAGAGTTGATTCAAGGAAGTTGCAAGATTGGAGATCGGTCTTAAAAGAAACTGCAGACATATTTGGTTATCATAATTCCTCAAATTTTCGGGATGAAGCTGACCTTATTGATGAAATAATCAAAGATGTATGCAAAAAGCTAGAAGGTAAAGGTAAAGACACAGTGGAGCCAAAGGACCATATTGGAATTGAGAAAAATTTGACTCCTATTGAATTATTTATGGAAGATGAATCACATGAAGTTAGAGTTTTAGGAATTTGGGGTAAAGGAGGAATAGGCAAAACCACCTTAGCTCATGCCACATTTGATAACTTTTACCACCAATTTGATAGGTCTTACTTTGCTGAAAATGTGAGAGAGAAATCAAAAAAGATTGGAATGGATTGTTTGCTTGAAGAAATTCTCTCTGTTCTACTAGATGAAGAAAAGCCCCGAATGGTTGGAAAGCCTAATATTCAAAGGAGGCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATGATGTAGACACCTCCAGTCAATTACAATATCTTATTGATGAAAATCTTTCATTGGGACCAAGTAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGAGCTCATGAAGTACATGAGGTGAAAGAATTAGGCAAGGAAGAATCGCTTCAACTTTTTTGCTGGCATGCTTTCAAGCAAGGCCATCCCGAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGTTCATATTTGAACTCTAGAAATACAGAAGCATGGGAGAAAAAGAAAGAAGATATTATGAGGGTGCTAGACGCTTGTGATGATGACCTCTACGTGGACATTGGAATAGATACGCTTCTGGATAAAGCACTCATAACCATTTCAAGTCACAATGGAGTAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAAGAATCTAGAGAGCACCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAGTTCAAGATATACTGGAAAATAACAAGGGAACTAATATAATTGAAGGCATCGCATTGAACACATGTGAGTTAAAAAGCAACATACGCCTGAGTGCTGACGGCTTTAGTAGAATGAGTAATTTAAAATTTCTCAAGATTAATTCTTATTTTCGAGACAAATATCAAGTGCTTTGTCCCTTTGGTCTAGAGTCACTTCCTGATAAACTAAGATATTTTTGTTGGGAAAGTTATCCATTGGAGACTCTACCGCTTGGTTTTTGTGCAAAGAATCTTGTTGAAATCCAACTGCCTTCTAGCAAACTTGTAAAACTATGGGATGGTGCGCAGGATCTTATGAATTTGAAGAAAATAAATCTTGCCTGCTCAAAGTTAAAGGAGTTGCCTGATTTCTCCACGGCACAAAATCTTGAAATAATGAGCCTCAGATTTTGTGTAAATTTATGCAGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGGATCTAGAGGGGTGCATCACACTAAAGAATCTTCATGGGAATAACCATTTGAAATCTCTCAAGAAACTCAACCTAAATTATTGCTCTGCTCTCAAGGAATTTTTGTTGTCATCAGAAGAAATGAGAAGTTTAAGTTTATTTGGTACTGGTATCGAAACCTTGAACTTGCCATTTGGACGGTACAATAAACTTGAAGAGCTATATCTCGGTGGGGCTCTCAGGAACTTTCAAGTAAATGAGCTAAGTAGCTTGACATCTCTTAAAATATTCTCTCTTGATCGTTTTGAAGGAAGAATAGTCAAATCAAAATTATTCATTCTGTTTGATGCGTGGTGTTCGTTAGAAGAATTGAGGTTGACAGACTGTGAGGTTTCTGAGATCCCTGATAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACGAGGAAGCAGCGTTAAGAGTTTGCCAGATAGCATCAAGCATCTTTCAGAGCTCAGAGAAATTGATTTGGGTAATTGCAAGAGCCTTAGGTCCTTACCAGAACTTCCATCCTCCCTTACTCATTGTCATCTCCACGAATGCCAATCACTGAAGACCTTCAGTTTCCCACTAATGCGAGCAATACATAACTCTAGTGAGGTTAGAGTTTGTTATCTCGGAAGCACAATCCCAGAGGGCTTCAAATATTCCCAGACCGCTAAGAGCTCTATTAGTATTGAGCTTGCACCAGCTTCTTCTGACCATTTATTGGGTTTCGCTTCTTGTTGCATTGTTTCCCCATCGACGCTGCTACGAGTTGACAGAAAATTCCACTTTGAAGATGAAAAGATCTATTACGAGAGTGACAAGATCATATTCCTTATGAATCCGAGTACAGATCATGTTTTTTTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGCGGCACTTACAAGTTTGCATGTGAATTCTTCTACGGAGTTTGCTCCGATCGTTCTGCGGATGAATTTAATGACGGGATAAAAAGGTGTGGAATTTGGCCAATATATGCATCAGAATTACAGGAAAAGTGGAATTCAGGCTAG 2883 0.3829 FRQKGIEVYVDETAERGDTISPALSEAIERSRIALVIFSENYASSRWCLEELVKIMQCRQDHSQIVIPVFYDIDPSNVRRQKGSYEGAFVQHRNCRVDSRKLQDWRSVLKETADIFGYHNSSNFRDEADLIDEIIKDVCKKLEGKGKDTVEPKDHIGIEKNLTPIELFMEDESHEVRVLGIWGKGGIGKTTLAHATFDNFYHQFDRSYFAENVREKSKKIGMDCLLEEILSVLLDEEKPRMVGKPNIQRRLRRTRVLLVLDDVDTSSQLQYLIDENLSLGPSSKVIITSRDRHVLISGGAHEVHEVKELGKEESLQLFCWHAFKQGHPEQGYEKLSMQVIEYAKGLPLALKVLGSYLNSRNTEAWEKKKEDIMRVLDACDDDLYVDIGIDTLLDKALITISSHNGVEIHDMLQEMAEEIVREESREHPESRSRLNDAKEVQDILENNKGTNIIEGIALNTCELKSNIRLSADGFSRMSNLKFLKINSYFRDKYQVLCPFGLESLPDKLRYFCWESYPLETLPLGFCAKNLVEIQLPSSKLVKLWDGAQDLMNLKKINLACSKLKELPDFSTAQNLEIMSLRFCVNLCSIHPSILSLPKLVSLDLEGCITLKNLHGNNHLKSLKKLNLNYCSALKEFLLSSEEMRSLSLFGTGIETLNLPFGRYNKLEELYLGGALRNFQVNELSSLTSLKIFSLDRFEGRIVKSKLFILFDAWCSLEELRLTDCEVSEIPDNISAMSLLKILSLRGSSVKSLPDSIKHLSELREIDLGNCKSLRSLPELPSSLTHCHLHECQSLKTFSFPLMRAIHNSSEVRVCYLGSTIPEGFKYSQTAKSSISIELAPASSDHLLGFASCCIVSPSTLLRVDRKFHFEDEKIYYESDKIIFLMNPSTDHVFLWYDPVDRMLKENQRRRFDEGGTYKFACEFFYGVCSDRSADEFNDGIKRCGIWPIYASELQEKWNSG 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2756g00001 960 ProSiteProfiles TIR domain profile. 1 142 IPR000157 GO:0007165
Pral2756g00001 960 PRINTS Disease resistance protein signature 250 264 - -
Pral2756g00001 960 PRINTS Disease resistance protein signature 757 773 - -
Pral2756g00001 960 PRINTS Disease resistance protein signature 178 193 - -
Pral2756g00001 960 PRINTS Disease resistance protein signature 343 357 - -
Pral2756g00001 960 Pfam C-JID domain 817 953 IPR045344 -
Pral2756g00001 960 SUPERFAMILY L domain-like 408 796 - -
Pral2756g00001 960 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 118 IPR035897 -
Pral2756g00001 960 Gene3D - 1 148 IPR035897 -
Pral2756g00001 960 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 144 - -
Pral2756g00001 960 Pfam Leucine Rich Repeat 529 548 IPR011713 -
Pral2756g00001 960 Gene3D - 308 379 IPR042197 -
Pral2756g00001 960 Pfam TIR domain 2 145 IPR000157 GO:0007165
Pral2756g00001 960 SMART till_3 1 115 IPR000157 GO:0007165
Pral2756g00001 960 Pfam NB-ARC domain 169 370 IPR002182 GO:0043531
Pral2756g00001 960 Gene3D - 149 299 IPR027417 -
Pral2756g00001 960 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 639 IPR044974 GO:0006952
Pral2756g00001 960 Gene3D Ribonuclease Inhibitor 397 638 IPR032675 -
Pral2756g00001 960 Gene3D Ribonuclease Inhibitor 639 831 IPR032675 -
Pral2756g00001 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 376 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2756g00001 Pral-Chr2756 601 4013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2756g00001 26 765 WRKY Transcription Factor Family AT4G12020 30.643 7.87e-84 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2756g00001 - - pcin:129311144 956.822