Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2755g00007 ATGGAAGCAGCTTCATGCATCAGCAGCGAAGGGCAGCCCATCCAATGCAAAGCCGCCGTGTGCCGGAAAGCCGGCGAGCCACTGGTGATCGAGGATGTCATGGTAGCGCCGCCCATGTCTCGTGAAGCTCGGATTCGCATCATATGCACCTCTCTGTGTCACAGTGACATCACATTCTGGAGGATGAAGGATGCTCCCGGAATTTGCCCAAGAATTCTGGGCCACGAGGCCGTGGGGATTGTGGAGAGCGTAGGAGAAGATGTGAGGGAAGTAGAGAAAGGAGACGTGGTGGTGCCGGTGTTCCTGCCGGAGTGCGGCGAGTGTGAGGACTGCAAGTCAAAGAAGAGCAACCTGTGCTCGACGGTGGGGTTCAGGGTGTCGCCGTGGATGCCCAGGCAGGAGAGCAGCAGATTCACAGACATGAAAGGGCAGCCCATATATCACTTCCTCTTTGTCTCCAGCTTCAGCCAATACACCGTCGTCGACGTTGCCAATCTCACCAAGATTCATCCATCTCTCCCTCCCAACAGGGCTTGCCTCCTCAGCTGCGGTGTTTCTACGGGAGTAGGTGCTGCTTGGTTGACAGCGGGCGTGGAGGCAGGCTCTACGGTTGCTATATTTGGGCTGGGTTCCATTGGATTAGCTGTCGCGGAGGGGGCTAGACTTTGTGGGGCTTCGAGGATCATCGGGGTGGATTTGAACCCACGAAAATTTGAAATTGGTAAAAAGTTTGGAGTCACTGACTTCGTCAATTCTGCAGAATGTGGGGACAAACCTGTTAGCCAGGTGATCAAAGACATGACTGGCGGAGGGGCTGATTATTGCTTCGAGTGCGTGGGGATGGCATCGTTGGTGCAAGAAGCATATGCTTCTTGTCGAAAGGGATGGGGAAAAACAGTAGTGGTGGGAGTTGACAAACCAGGATCCAAGTTAACCCTTAGTTCTGCTGAAGTCCTTCACAGTGGAAAAGTCCTCATGGGATCCTTATTCGGGGGACTCAAGCCCAAGACTCATATTCCCATTCTCGTTAAGCGTTATCTCGACAAGGAGCTGCGGCTGGATGATTTTGTGACCCACGAGATTGACTTCAAGGACATAAACAGAGCTTTTGATTTATTGCTGGAAGGACAGTGCCTTCGATGCGTGATTTGGATGAACAAATAA 1164 0.5258 MEAASCISSEGQPIQCKAAVCRKAGEPLVIEDVMVAPPMSREARIRIICTSLCHSDITFWRMKDAPGICPRILGHEAVGIVESVGEDVREVEKGDVVVPVFLPECGECEDCKSKKSNLCSTVGFRVSPWMPRQESSRFTDMKGQPIYHFLFVSSFSQYTVVDVANLTKIHPSLPPNRACLLSCGVSTGVGAAWLTAGVEAGSTVAIFGLGSIGLAVAEGARLCGASRIIGVDLNPRKFEIGKKFGVTDFVNSAECGDKPVSQVIKDMTGGGADYCFECVGMASLVQEAYASCRKGWGKTVVVGVDKPGSKLTLSSAEVLHSGKVLMGSLFGGLKPKTHIPILVKRYLDKELRLDDFVTHEIDFKDINRAFDLLLEGQCLRCVIWMNK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2755g00007 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Pral2755g00007 387 Gene3D - 188 328 - -
Pral2755g00007 387 SUPERFAMILY GroES-like 9 195 IPR011032 -
Pral2755g00007 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Pral2755g00007 387 Gene3D - 19 380 - -
Pral2755g00007 387 Pfam Alcohol dehydrogenase GroES-like domain 42 168 IPR013154 -
Pral2755g00007 387 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
Pral2755g00007 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 328 - -
Pral2755g00007 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Pral2755g00007 387 PANTHER ALCOHOL DEHYDROGENASE 11 383 - -
Pral2755g00007 387 FunFam Alcohol dehydrogenase 6 19 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2755g00007 Pral-Chr2755 23888 27460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2755g00007 41 358 Monolignol Biosynthesis Gene Families AT4G37990 22.687 8.80e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2755g00007 K00121 - qsu:112018306 638.262