Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2753g00008 ATGGCAATGGAAAATTATGTAGGACCTGCAAGGTGTTATCGTCAAATAAAAAACAAACCTTACCCTAAGTCACGCTTTTGCCGTGGTGTTCCTGATCCCAAGATCAGAATTTATGATGTTGGAATGAAGAGGAAAGGGGTTGATGAGTTTCCTTTCTGCGTCCATCTGGTTAGCTGGGAGAAGGAAAATGTTTCAAGTGAAGCGTTGGAAGCTGCTAGGATTGCTTGCAACAAATACATGGCCAAATTTGCTGGAAAGGATGCGTTCCATTTGAGAGTTAGGGTTCACCCATTCCATGTTCTTAGGATCAACAAAATGCTTTCATGTGCTGGAGCTGATAGGCTTCAGACAGGGATGAGAGGTGCATTTGGAAAGCCACAAGGTACATGTGCTAGAGTTGCCATCGGTCAGGTGCTTCTTTCTGTCCGTTGCAAGGACAGCAACAGCCATCATGCCCAGGAAGCTCTCCGTCGTGCTAAGTTCAAGTTCCCTGGTCGGCAAAAGATCATAGTTAGCAGGAAATGGGGTTTCACGAAGTTTAACCGAACAGACTATGTGAGGTACAAGTCAGAGAACAGAATTCTGCCAGATGGTGTAAATGCAAAGCTTCTTGGATGCCATGGACCACTGGCTAACCGTGAACCCGGGAGAGCTTTCCTGGAGCATGCAACTGCATAG 678 0.4617 MAMENYVGPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYVRYKSENRILPDGVNAKLLGCHGPLANREPGRAFLEHATA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2753g00008 225 CDD Ribosomal_L16_L10e 45 170 IPR016180 GO:0003735|GO:0005840|GO:0006412
Pral2753g00008 225 PANTHER 60S RIBOSOMAL PROTEIN L10 9 217 IPR001197 GO:0003735|GO:0005840|GO:0006412
Pral2753g00008 225 Pfam Ribosomal protein L16p/L10e 16 170 IPR016180 GO:0003735|GO:0005840|GO:0006412
Pral2753g00008 225 NCBIfam 50S ribosomal protein L16 9 178 IPR001197 GO:0003735|GO:0005840|GO:0006412
Pral2753g00008 225 FunFam 60S ribosomal protein L10 6 210 - -
Pral2753g00008 225 ProSitePatterns Ribosomal protein L10e signature. 112 133 IPR018255 GO:0003735|GO:0005840|GO:0006412
Pral2753g00008 225 Gene3D Ribosomal protein L10e/L16 7 220 IPR036920 GO:0003735|GO:0005840|GO:0006412
Pral2753g00008 225 SUPERFAMILY Ribosomal protein L16p/L10e 9 177 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2753g00008 Pral-Chr2753 20832 22227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2753g00008 9 224 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 85.648 2.27e-140 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2753g00008 K02866 - pvy:116105818 438.343