Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2753g00005 ATGGTTTCCTCGCAATTATCTGCCTTTAATGGGAGTCTTTTGCAGAAGCCTTTCCCGAAGCAATTGCTTCTTCCTAGTGGATCACCTGATGTTTTGCCTTATGGTTATGATGAGGTCAATTTTTCTGATGTGTTTGGTCCAGTTCCTATTCAACCGCCAAAAGAATTCAATTGTGAGAAATCAAGAAATTTGGTGGCTGCACCAAATCCTGATGAAAATACATACAACAATCCTACTGTCATTCACAGCCGATCCCATTCTTTTGTGGGGCCCACATCATATGTTAGTCATTCCTCTAGCCTTACCAAAGTCAGCTTACTTGAGAAGCAGGGTGCACTGGAACTGGCGGGGTTTTGTAGAGAAACGCATGAAGAATTTAAGGAGAAGTCCGATAAACAATTTAATAACATCAATGTGAAACATCAAAGTGTTGGACTTGAAGATTTTGAAGTCCTAAAAGTTGTTGGGCAAGGTGCATTTGGGAAGGTGTACCAGGTGAGGAGGGCAGGGACATCTGATATTTATGCAATGAAGGTAATGCGGAAGGACAAGATCATGCAGAGAAATCACTCTGAATATGTGATATCTGAAAGGGATATATTAACGAAAGTTTATCACCCTTTTATTGTGCGACTTAGACACTCATTCCAGACAAAGTATAGGTTGTACATTGTGCTTGATTTCGTGAATGGCGGTCACCTTTTCTTTCAGCTTTGTCGCCAAGGCTTATTCAGGGAGGACTTGGCCCGCTTTTATGCTGCAGAGATTGTTTCAGCTGTCTCTCATCTTCATGCAAATGGCATAACGCACAGGGATCTTAAACCTGAAAATATCCTTCTGGACGCACGTGGCCATGTAGTTTTGACGGATTTTGGCCTAGCTAGGCAATTCTGTGACGGTGAGAATGCGAGGTCAAATTCTATGTGTGGAACTTTAGAATACATGGCCCCTGAAATTCTTCTGGGGAAAGGACATGATAAGGCAGCTGATTGGTGGAGCGTTGGAATTCTAATTTTTGAAATGCTAACTGGGAAGCCTCCCTTTACCAGTGGAAATAGACAGAAGATCCAGCAAAAGATAATAAAGGACAAGGTCAAGCTTCCGGCATTTTTGTCTAGTGAGGCCCATTCACTGTTAAAAGGGTTGTTGCAGAAAGAAGCCAGCAAACGCCTTGGCAATGAACCACGTGGTAGCGACGTGATTAAGAGTCACAAGTGGTTTAAGTTAATTAATTGGAAGAGACTAGAAGCTCGTGAAATTAGGCCCAGCTTTGTCCCAGAAGTTTCCGGGAATCACTGTGTTGCTAACTTTGAGGATCGGTGGACTAATATGCCTTTGCTGGATTCTCCTGTTGTCACTCCCAAATTCAATGATAACCCCTTCAGTGGGTTTGATTGGGTGATCTAG 1407 0.4279 MVSSQLSAFNGSLLQKPFPKQLLLPSGSPDVLPYGYDEVNFSDVFGPVPIQPPKEFNCEKSRNLVAAPNPDENTYNNPTVIHSRSHSFVGPTSYVSHSSSLTKVSLLEKQGALELAGFCRETHEEFKEKSDKQFNNINVKHQSVGLEDFEVLKVVGQGAFGKVYQVRRAGTSDIYAMKVMRKDKIMQRNHSEYVISERDILTKVYHPFIVRLRHSFQTKYRLYIVLDFVNGGHLFFQLCRQGLFREDLARFYAAEIVSAVSHLHANGITHRDLKPENILLDARGHVVLTDFGLARQFCDGENARSNSMCGTLEYMAPEILLGKGHDKAADWWSVGILIFEMLTGKPPFTSGNRQKIQQKIIKDKVKLPAFLSSEAHSLLKGLLQKEASKRLGNEPRGSDVIKSHKWFKLINWKRLEAREIRPSFVPEVSGNHCVANFEDRWTNMPLLDSPVVTPKFNDNPFSGFDWVI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2753g00005 468 SUPERFAMILY Protein kinase-like (PK-like) 146 457 IPR011009 -
Pral2753g00005 468 PANTHER RIBOSOMAL PROTEIN S6 KINASE 108 453 - -
Pral2753g00005 468 FunFam Non-specific serine/threonine protein kinase 229 426 - -
Pral2753g00005 468 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral2753g00005 468 FunFam Non-specific serine/threonine protein kinase 146 246 - -
Pral2753g00005 468 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Pral2753g00005 468 Gene3D Transferase(Phosphotransferase) domain 1 229 426 - -
Pral2753g00005 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Pral2753g00005 468 CDD STKc_AGC 155 407 IPR045270 GO:0004674|GO:0005524
Pral2753g00005 468 SMART serkin_6 149 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2753g00005 468 Pfam Protein kinase domain 149 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2753g00005 468 Gene3D Phosphorylase Kinase; domain 1 146 447 - -
Pral2753g00005 468 SMART pkinase_C_6 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral2753g00005 468 ProSiteProfiles Protein kinase domain profile. 149 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2753g00005 Pral-Chr2753 12537 16010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2753g00005 1 467 AGC Kinase Gene Family AT3G08720 60.714 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pral2753g00005 Pkinase 3.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2753g00005 K04688 - tcc:18587513 659.062