Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2753g00004 ATGGTTTCCTCGCAATTATCTGCCTTTAATGGGAGTCTTTTGCAGAAGCCTTTCCCGAAGCAATTGCTTCTTCCTAGTGGATCACCTGATGTTTTGCCTTATGGTTATGATGAGGTCAATTTTTCTGATGTGTTTGGTCCAGTTCCTATTCAACCGCCAAAAGAATTCAATTGTGAGAAATCAAGAAATTTGGTGGCTGCACCAAATCCTGATGAAAATACATACAACAATCCTACTGTCATTCACAGCCGATCCCATTCTTTTGTGGGGCCCACATCATATGTTAGTCATTCCTCTAGCCTTACCAAAGTCAGCTTACTTGAGAAGCAGGGTGCACTGGAACTGGCGGGGTTTTGTAGAGAAACGCATGAAGAATTTAAGGAGAAGTCCGATAAACAATTTAATAACATCAATGTGAAACATCAAAGTGTTGGACTTGAAGATTTTGAAGTCCTAAAAGTTGTTGGGCAAGGTGCATTTGGGAAGGTGTACCAGGTGAGGAGGGCAGGGACATCTGATATTTATGCAATGAAGGTAATGCGGAAGGACAAGATCATGCAGAGAAATCACTCTGAATATGTGATATCTGAAAGGGATATATTAACGAAAGTTTATCACCCTTTTATTGTGCGACTTAGACACTCATTCCAGACAAAGTATAGGTTGTACATTGTGCTTGATTTCGTGAATGGCGGTCACCTTTTCTTTCAGCTTTGTCGCCAAGGCTTATTCAGGGAGGACTTGGCCCGCTTTTATGCTGCAGAGATTGTTTCAGCTGTCTCTCATCTTCATGCAAATGGCATAACGCACAGGGATCTTAAACCTGAAAATATCCTTCTGGACGCACGTGGCCATGTAGTTTTGACGGATTTTGGCCTAGCTAGGCAATTCTGTGACGGTGAGAATGCGAGGTCAAATTCTATGTGTGGAACTTTAGAATACATGGCCCCTGAAATTCTTCTGGGGAAAGGACATGATAAGGCAGCTGATTGGTGGAGCGTTGGAATTCTAATTTTTGAAATGCTAACTGGGAAGCCTCCCTTTACCAGTGGAAATAGACAGAAGATCCAGCAAAAGATAATAAAGGACAAGGTCAAGCTTCCGGCATTTTTGTCTAGTGAGGCCCATTCACTGTTAAAAGGGAAAGAAGCCAGCAAACGCCTTGGCAATGAACCACGTGGTAGCGACGTGATTAAGAGTCACAAGTGGTTTAAGTTAATTAATTGGAAGAGACTAGAAGCTCGTGAAATTAGGCCCAGCTTTGTCCCAGAAGTTTCCGGGAATCACTGTGTTGCTAACTTTGAGGATCGGTGGACTAATATGCCTTTGCTGGATTCTCCTGTTGTCACTCCCAAATTCAATGATAACCCCTTCAGTGGGTTTGATTGGGTGATCTAG 1398 0.4278 MVSSQLSAFNGSLLQKPFPKQLLLPSGSPDVLPYGYDEVNFSDVFGPVPIQPPKEFNCEKSRNLVAAPNPDENTYNNPTVIHSRSHSFVGPTSYVSHSSSLTKVSLLEKQGALELAGFCRETHEEFKEKSDKQFNNINVKHQSVGLEDFEVLKVVGQGAFGKVYQVRRAGTSDIYAMKVMRKDKIMQRNHSEYVISERDILTKVYHPFIVRLRHSFQTKYRLYIVLDFVNGGHLFFQLCRQGLFREDLARFYAAEIVSAVSHLHANGITHRDLKPENILLDARGHVVLTDFGLARQFCDGENARSNSMCGTLEYMAPEILLGKGHDKAADWWSVGILIFEMLTGKPPFTSGNRQKIQQKIIKDKVKLPAFLSSEAHSLLKGKEASKRLGNEPRGSDVIKSHKWFKLINWKRLEAREIRPSFVPEVSGNHCVANFEDRWTNMPLLDSPVVTPKFNDNPFSGFDWVI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2753g00004 465 FunFam Non-specific serine/threonine protein kinase 146 246 - -
Pral2753g00004 465 FunFam Non-specific serine/threonine protein kinase 229 423 - -
Pral2753g00004 465 ProSiteProfiles Protein kinase domain profile. 149 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2753g00004 465 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Pral2753g00004 465 Gene3D Transferase(Phosphotransferase) domain 1 229 423 - -
Pral2753g00004 465 CDD STKc_AGC 155 404 IPR045270 GO:0004674|GO:0005524
Pral2753g00004 465 SMART pkinase_C_6 405 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral2753g00004 465 Pfam Protein kinase domain 149 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2753g00004 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Pral2753g00004 465 ProSiteProfiles AGC-kinase C-terminal domain profile. 405 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral2753g00004 465 PANTHER RIBOSOMAL PROTEIN S6 KINASE 108 450 - -
Pral2753g00004 465 SUPERFAMILY Protein kinase-like (PK-like) 146 454 IPR011009 -
Pral2753g00004 465 Gene3D Phosphorylase Kinase; domain 1 146 444 - -
Pral2753g00004 465 SMART serkin_6 149 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2753g00004 Pral-Chr2753 12534 16010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2753g00004 1 464 AGC Kinase Gene Family AT3G08720 60.084 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pral2753g00004 Pkinase 3.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2753g00004 K04688 - tcc:18587513 648.662