Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2750g00023 ATGGGGGGTCATGAAAACACCGTGGAGTTTCAACACCGAAACGAGGGCATTCTGAGTCGTCCGGTATCGGGTTTGGGCACCAATGTTTCAGATTTAAGCAATCCTTTTCTTGGTTCATCTGCCTGGGATCCACTTTTTCCATTGAGTCAGACTCACAGCTTTGGGGGCTCATCATTGGTTTCACATAGTGACTTTGCTAACTCTTCTTACCCGAGTGTCTTGGAAAATCAGGGAATGAGCAACTCCTCTCACCTTGTTCACTATATGTCTGACTCAAATTTTGCTGATATGATCCCGAAGATCCCTCCCTATGGAAATGGCGATATAGCTAGTGCAGGATATGCGTCAAATTATAATCCAAATAAGGAAGCAGGCATTGGAATGGCTCCAATAAATGATGCACAATTGCTGGGTGAGCATTCCACTCCTGAAGAGGGAGGCACGTCTTCACCTAGTGGAAATAGAAGAAAACGAGGGCTTGATCATAATCCTACATTCAATCCAAGTAAGAGTGCTGAAGGGGAAGCACTCAAGGGTTCATCAGGGAAAAGCTTAGATGGCTTGAAAGAACAAGATGATAAGAAGCCAAAATCTGATCAAAATACAAGTCCAGATTTGCGTGGTAAGCAATCAGTGAAGCAACCTAAGGACAACTCTCAGAGTGAAGACGCTCCCAAAGACAATTTCATCCATGTGAGAGCTCGGAGAGGTCAAGCTACAAACAGTCATAGCCTTGCAGAAAGGATAAGAAGAGAAAAGATAAGTGAGAGAATGAAAATGAAGTTACTCCAAGAACTTGTTCCTGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTTGATGAGATTATTAACTATGTGCAATCACTTCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACCGTGAACCCTGAACTGAATCTTGATGCAGAGCGGATCCTATCCAAAGATATTCTGCAGTCCCGCATCGGACATGGAGTTATTGGCGGATATGGAGGCGGTGTCATCGGCTCAAATCACCTATTTCTCGGTGGAGGTTTTCAGGGGACCCTGGGAAGCATACCCAGCACATCACAAAATATCCCTCCTTTGCCTCAGAGTGTTATGGATCCTGAACTCCAGAGCATATATGGAATGGGATACGATTCTAACTCAGCTCCTCAAAATTTGGGACCACAAACAGGGCGGTAG 1197 0.4453 MGGHENTVEFQHRNEGILSRPVSGLGTNVSDLSNPFLGSSAWDPLFPLSQTHSFGGSSLVSHSDFANSSYPSVLENQGMSNSSHLVHYMSDSNFADMIPKIPPYGNGDIASAGYASNYNPNKEAGIGMAPINDAQLLGEHSTPEEGGTSSPSGNRRKRGLDHNPTFNPSKSAEGEALKGSSGKSLDGLKEQDDKKPKSDQNTSPDLRGKQSVKQPKDNSQSEDAPKDNFIHVRARRGQATNSHSLAERIRREKISERMKMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDAERILSKDILQSRIGHGVIGGYGGGVIGSNHLFLGGGFQGTLGSIPSTSQNIPPLPQSVMDPELQSIYGMGYDSNSAPQNLGPQTGR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2750g00023 398 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 238 290 IPR011598 GO:0046983
Pral2750g00023 398 SMART finulus 244 296 IPR011598 GO:0046983
Pral2750g00023 398 MobiDBLite consensus disorder prediction 185 202 - -
Pral2750g00023 398 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 236 307 IPR036638 GO:0046983
Pral2750g00023 398 MobiDBLite consensus disorder prediction 138 229 - -
Pral2750g00023 398 FunFam Basic helix-loop-helix transcription factor 235 309 - -
Pral2750g00023 398 Gene3D - 235 312 IPR036638 GO:0046983
Pral2750g00023 398 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 150 355 IPR024097 GO:0006355
Pral2750g00023 398 CDD bHLH_AtBPE_like 228 315 - -
Pral2750g00023 398 MobiDBLite consensus disorder prediction 203 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2750g00023 Pral-Chr2750 148647 150934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2750g00023 33 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 42.179 1.41e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2750g00023 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2750g00023 - - gmx:100801930 478.018