Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2750g00016 ATGGGGGCTGAGAAAGCCACGGACGTGTCGGACTTTGAGGACGAGGATGACCTCGACGAAGAACCCGGGGAAGTGATCGAATCGGCGCCTCCGCAGAAGGTTGGTGAAGAGAGAGAACTGAATAACTCCCGCCTCAAGAAGAAACTTCTCAAGCGCGGGCATGGGTGGGAGACCCCTGAATTCAATGACGAAGTAACCGTTCACTACGTGGGGACTTTGCTTGACGGGACAAAGTTCGATTCCACCAGAGATAGGGGTGAACCTGTTACATTTACAGTCGGTCAAGCTCAAGTGGCTGCTGGGTTAGATCACGGGATTATCACCATGAAAATGGGAGAGGTCGCATTATTCACATTGCCTGCTGAGTCAAGCAATGAAGTTGGGAATTCCGGAAGTATTCCACCCAACTCAGTTGTCCAGTTTGAGGTTGAACTCATTTCGTGGATCAAAGTGGTTGATGTTTGCAAAGATGGCGGGATTATCAAGAAAATTATGGAGAAGGGAAACAGGAATGAGAGACCCTGTGATCTAGATGAAGTTCTAGTGAAGTACCGGGTGACATTAATTGACGGCATTACTGTTGCAGAGACATCAGAAGAGGGATTTGAATTCCGTATGGATGATGGTCATCTGTTTCCAGGATTACCAAAAGTAATTATGACTATGGAGAGGGGAGAGAAGGCGAAGTTAATTGTTCAACCTCAGTATGCCTTTGGAGAGAAGGGGGGAGAAGCAGAAAGCAGGCTGGATTCAATCCCGCCAAATTCAGTATTGCATGTCGATATTGAATTGGTGTCCTTCAAGCCTGTCATTAATGTTACTGGAGACTCCAAAGTTCTAAAGAAGATACTGAGAGAAGGGGAAGGCTCCGTAACAGCCAATGAGGGTGCCATTGTTACGATTAGTTATGTAGCTAAGGTGGAAGATGGCCCAATATTTGAGAAGAAAGGCATTGATGAAACAAAGCCTTTGGAATTCATAACTGATGAAGAACAAGTCATTGTTGGTCTAGATCGAGCAGTAGCTACAATGAAGAAGGGTGAGAAGGCCATTGTAAGTATACATCCTGATTATGCATTTGGAAGCATTGAAGCAAGATTTGATTTGGCTACTGTTCCCCCGGGGTCTAGTGTTGTCTATGAAGTTGACATGGTGGACTTTATTAAGGAGAAAGGACCATGGGAATTAAATAATAGTGAGAAAATTGAGGCAGCTGGGAAGAAGAAAGAAGAAGGAAATCTGTTATTTAAAAATGGCAAGTTTCAGAGAGCAGGGAAAAAGTACGACAAGGCTGTTGATTATGTTAGTGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCTGGCTAAGGCACTGAGAGTGTCATGCTGGTTGAATGGTGCAGCATGTAGCCTCAAACTTGATAACTTTTCAGAAGCAATCAAGTTATGCTCTCAGGTGCTTGATGTTGAGTTCCGTAATGTGAAAGCATTGTACAGACGAGCACAAGCATGTATAGAAACTGGGGACTATATTTTGGCAGATGTAGACATAAAGCAAGCTCTTGAGGCAGACCCACAGAACAGGGAAGTAAAGCAGCTTCAGAGGAAATTGAAGCAACTTCAACTTGAGAGTGACAAAAGAGATGCTAAACTCTATGCAAATATGTTTGCACATAAAGAGAAAGACTCGCCTGTAGTAACAAAGAGATTGAAGGTTGAGAAAAGCAATGATGAAAGGAAAGATGAAGAGGTCACTAGAATGGAAGAGGACAAAGTGGCTGACAGTGCCGCTCCCCCTGATGATGTAATTAACGATTGA 1800 0.44 MGAEKATDVSDFEDEDDLDEEPGEVIESAPPQKVGEERELNNSRLKKKLLKRGHGWETPEFNDEVTVHYVGTLLDGTKFDSTRDRGEPVTFTVGQAQVAAGLDHGIITMKMGEVALFTLPAESSNEVGNSGSIPPNSVVQFEVELISWIKVVDVCKDGGIIKKIMEKGNRNERPCDLDEVLVKYRVTLIDGITVAETSEEGFEFRMDDGHLFPGLPKVIMTMERGEKAKLIVQPQYAFGEKGGEAESRLDSIPPNSVLHVDIELVSFKPVINVTGDSKVLKKILREGEGSVTANEGAIVTISYVAKVEDGPIFEKKGIDETKPLEFITDEEQVIVGLDRAVATMKKGEKAIVSIHPDYAFGSIEARFDLATVPPGSSVVYEVDMVDFIKEKGPWELNNSEKIEAAGKKKEEGNLLFKNGKFQRAGKKYDKAVDYVSEDGSFGDDEQKLAKALRVSCWLNGAACSLKLDNFSEAIKLCSQVLDVEFRNVKALYRRAQACIETGDYILADVDIKQALEADPQNREVKQLQRKLKQLQLESDKRDAKLYANMFAHKEKDSPVVTKRLKVEKSNDERKDEEVTRMEEDKVADSAAPPDDVIND 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2750g00016 599 Gene3D - 152 267 IPR046357 GO:0003755
Pral2750g00016 599 SUPERFAMILY FKBP-like 40 151 - -
Pral2750g00016 599 SMART tpr_5 454 487 IPR019734 GO:0005515
Pral2750g00016 599 SMART tpr_5 488 521 IPR019734 GO:0005515
Pral2750g00016 599 SMART tpr_5 405 438 IPR019734 GO:0005515
Pral2750g00016 599 MobiDBLite consensus disorder prediction 561 590 - -
Pral2750g00016 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 265 IPR001179 GO:0003755
Pral2750g00016 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 146 IPR001179 GO:0003755
Pral2750g00016 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 384 IPR001179 GO:0003755
Pral2750g00016 599 SUPERFAMILY FKBP-like 157 269 - -
Pral2750g00016 599 MobiDBLite consensus disorder prediction 1 41 - -
Pral2750g00016 599 PANTHER PEPTIDYLPROLYL ISOMERASE 150 269 - -
Pral2750g00016 599 Coils Coil 517 544 - -
Pral2750g00016 599 Gene3D Tetratricopeptide repeat domain 392 548 IPR011990 GO:0005515
Pral2750g00016 599 MobiDBLite consensus disorder prediction 561 599 - -
Pral2750g00016 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 268 IPR001179 GO:0003755
Pral2750g00016 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 296 388 IPR001179 GO:0003755
Pral2750g00016 599 MobiDBLite consensus disorder prediction 9 24 - -
Pral2750g00016 599 SUPERFAMILY FKBP-like 274 405 - -
Pral2750g00016 599 SUPERFAMILY TPR-like 400 540 IPR011990 GO:0005515
Pral2750g00016 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 149 IPR001179 GO:0003755
Pral2750g00016 599 Gene3D - 38 151 IPR046357 GO:0003755
Pral2750g00016 599 Gene3D - 268 391 IPR046357 GO:0003755
Pral2750g00016 599 FunFam Peptidylprolyl isomerase 269 390 - -
Pral2750g00016 599 FunFam Peptidylprolyl isomerase 393 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2750g00016 Pral-Chr2750 91641 97513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2750g00016 33 551 Calmodulin-binding Proteins AT3G25230 55.662 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2750g00016 K09571 - qsa:O6P43_019033 833.172