Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral2740g00001 | ATGTTCAAGGCATCTTCGTCTCTCACCTTTCTTTCCTCTCTCCTCTTCATTTCCGCCATAGCCGCCACGCCCTCAAGCTTCATCAGATCCTCTTGCAGTACCACAACGTACCCTTCAATCTGCGTCGAATCTCTCTCCTCCTACGCCTCCTCCATCCAACAAAATCCTCACCAGCTGGTTCAAACCGCTCTGTCTCTCAGCCTCAACACCACTCTCTCCACCAAATCCTTCGTCTCAAAGCTCAACAAGTTCAGAGGCCTCAAGAACAGAGAGAACCAGGCTCTCCATGACTGCTTGGAAGAGATCGGCGAAAGCGTCGATCGGCTCAGCCGATCCATCAAGGAGCTTAAACTCTGCGTCAAATCCAAGGGTCAGGACTTCCAATGGCACATAAGCAATGTCGAGACGTGGGTGAGCTCTGCGATCACCGATGAAAACACTTGTACAGATGGATTCGCCGGAAAGGCTTTGAATGGCAGAATCAAGAGTTCTATAAGGACCAGAATGCTTCGTGTTGCTCAGGTCACTAGTAATGCTCTCTCCCTCATCAATCACTACGCCTCTAAAGGCTAA | 573 | 0.5009 | MFKASSSLTFLSSLLFISAIAATPSSFIRSSCSTTTYPSICVESLSSYASSIQQNPHQLVQTALSLSLNTTLSTKSFVSKLNKFRGLKNRENQALHDCLEEIGESVDRLSRSIKELKLCVKSKGQDFQWHISNVETWVSSAITDENTCTDGFAGKALNGRIKSSIRTRMLRVAQVTSNALSLINHYASKG | 190 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral2740g00001 | 190 | CDD | PMEI-like_3 | 30 | 188 | - | - | |
| Pral2740g00001 | 190 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 22 | 186 | IPR035513 | - | |
| Pral2740g00001 | 190 | FunFam | Pectin methylesterase inhibitor 1 | 23 | 186 | - | - | |
| Pral2740g00001 | 190 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 25 | 186 | IPR035513 | - | |
| Pral2740g00001 | 190 | Pfam | Plant invertase/pectin methylesterase inhibitor | 26 | 182 | IPR006501 | GO:0004857 | |
| Pral2740g00001 | 190 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 10 | 182 | - | - | |
| Pral2740g00001 | 190 | NCBIfam | pectinesterase inhibitor domain | 6 | 186 | IPR006501 | GO:0004857 | |
| Pral2740g00001 | 190 | SMART | PMEI_2 | 23 | 182 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral2740g00001 | Pral-Chr2740 | 22398 | 23259 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral2740g00001 | 23 | 183 | Carbohydrate Esterase | AT3G14310 | 32.927 | 3.21e-23 | 94.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral2740g00001 | - | - | pcin:129313593 | 324.324 |