Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2739g00001 ATGGGAAATAACAAAGAAGCATTTTCCTCAGAATCTTCTAGGTCCAATCCAACTCGAAGAACCTGGAAGTATGACGTTTTCTTGAGTTTTAGAGGTGAAGACACTCGTGAAGGCTTCACAAGCCACTTGTACCAAGCATTGGATGGGAGAGGATTCCATGTTTTTATAGACTATGGACTTACAAGAGGAGAAGTTATCTCACAAGAACTGCTGCAAGCAATTGAAGAATCTCGCTTTGCAATTGTTGTTCTCTCTGAAAATTATGCTTCTTCTTTTTGGTGTTTAGATGAGCTCCAACATATTCTTACCTCAAGAAATAACTCAGATCAAATAGTCTTCCCTGTCTTTTATCGTGTACATCCACCTGATGTGATGAACCAACGAGGAATATTTGGTGAAGCTTTTGCCAAACTTGCACGCGGTCAGCCCCAGTCGAAGGTTAAAAAATGGAGGGATTCTCTAACAGAAGTGGCTCATTTAGCTGGTTTTGATACCCGTAATTACCGGGACGAAGCAGCACTCATTATGGATGTGGTTGAAAATTTATGGGGCCAACTTCGTTCTGTACTGCCACCAGTCAAGGCACATAGTGATGCACTGGTTGGAATTGAGCCGAGGGTAGACGAAATGCTTTCAATCTCAGGGATAGGTTTGGATGACGTTCGGTTTATAGGAATATGGGGCATGGGCGGTGTTGGCAAGACCACTCTTGCTAGAGTTATCTATGAGACGCTCCATCACCTGTTTGATTTTCCTTGTTTTCTTGCCAATGTTAGGGAGGTTTCAGCTGAAAGAAATGGCATACTTCGCTTGCAGAAACAACTGCTTTCACATTTCAACGTAAAAGACTTACATATTGAAGACACGTATGAAGGACAGAACATGTTAGGATACCTTCTCCGCAACAGAAAGGTTTTGCTTGTCCTTGATGATGTAAGTGATCTAGGACAGTTACGGAGTTTAGCTAGAAGCCGAAAGTGGTTTGGTGATGGTAGTAGAATATTCATAACAACTAGAGATTTAGACTTACTGACATGTCATGAAGTTGATGAAACATACGAGATTACACCCATGACCGATGCAGAATCTCTTCAACTCTTTTATCAGAAAGCATTTGGAGGAAGAGGTGTCCCTGCTAATGAAGACCAATTTTGGCAGTTGGCTAGATCAGCAATTGGTTATGCTCATGGCCTTCCTTTGGCTCTCTGTGTTTTAGGCTCCTTCCTTTGTGGTAGAGATGATTTAACAGAATGGGAAGATGCTTTGCAATTGTGGGGAAAAGATGAAATAATTCAAATATTGGCAGGTTGTGGACTTCCTGCTCCAGCTAGTTTAGGTAGCCTTCGAAAAAAATCTTTGCTTGCTGAAATTGAGATTGGCGGTACTACATATGTAGAGATGCATGATTTGATTCAAGAGATGGGTAGACTGATTGTTATTGAGGAATCTCCTGTTATTGTTGGAAGACGCAGTAGACTGTGGCTTCCCAATGACATTGACCAACTAATGGAAAGTGACATGGGAACTGAAGCAACGGAAGGCATGGTTCTGCCTCATAGCTTTGAGAAAGATGAAGTAGATTGGAATCCTGAAGCCTTTTTAAAATTGTGTTCGCTTCAAATGCTTATCATATCAAGTAATTTTAATCTTTCCCTTCCCTTCAGAGGTCTTCCTCGAATATTGAAAGTTCTTCATTGGTATGGATATCCTATGGAATCTCTTCCTTCTAATGTGAAGATGGATCAAATCAGATATCTCAAAATGCACAATAGCAAAATAAAGCGCCTTTCTAATGATAAACAGTCTATGAAGAAGCTAAAGATTTTGGACTTAAGCCATTCCAAATATCTCCTTCAAACTCCAAATTTTGTTGGATATCATAATTTAAAAAGACTGATTCTTGAAGGCTGCACATCACTTGTTGAAATTCATTCTTCACTCGGACAGCTTCACTGTCTTGTTGAAGTAAATTTGAAAGGTTGCATTAATCTTAAAGTCCTTCCCCAAAAATTGGAAATGGATTCTCTAGAAAAATTAGTTCTCTGTGGATGTGTTCGAGTAAGAATTCTTCCGGAATTTGAAGAAAATATGGAAAAGCTTAGAACACTTGATGTCAAAGAGACAAGTGTAACCAGACTTCCTAAGTCCCTTGGATACTTAACAGGGATTGAAACTTTGGATTTAAGGGGTTGCCAAAAGCTTGTTGGCCTTCCCCATGACATTCACAAATTGAAGCGTCTGAAAGTTCTTGATATCTCATGCTGCTCAAATTTTTCTGCATTACCAGAAAAGCTCAATGAAAATGAAGCCTTGGAAAAGCTTGATGCAAGTGGAACAGCTATCGTAGAAGTACCTTCTTCTATTTGTCATTTAAAAAAATTAAAGGCACTAGCATTTCATGGATGCAAAAATCCAACTTCCAATTCAAGTGTGTGGTCTCTTCTTTGGAGCCAAATGTTTCAGAGTCATTCATCTCCTAAGTACTTAACATTGCCTGCTTCTATCTTCAATATTCAATCATTGACAGAATTAGATTTGAGCTACTGCAATATTGTTGATGGGATCATTCCTAATGAACTCAATGGCTTATCATCATTGCGGACATTAGATTTGAGTGGAAACGTGTTTATGAATCTACCTGATGGCTGCATTTCTAATCTTTTGAATCTACAGTCTTTTTATTTGAATTCTTGCCCAAAGCTTCAATTTTTGCCACAGCCTTCGCCGAGTTTAAATCTAATGGATGCCGGAGAATGTGGTTCATTGAGAACTTTGTCAGACAGACAATTGTTACATCTCTTTGCTTCAATTGAACAGCATGCTGAAGAATTAAGGAGAATTAAGTCTTTTTCAGTGACTATTCCAGGGAGTGAAATACCATCATGGTTTGAGAATCAGAACCATCTTCGTCTGAATGAGAAACGTGAAGCCTCTGTAACCATAGACATGCCTGAAGATGAATGGTTGGGAATTGGGTTGTGCACAGTAATTGATGATAAGATTTGTTTGCCTCGCTTGGGGTTTGATTTCAAAGCTTCCGATGGTAAGTATGTATCCCTTCAAGGAAGGACACGTGAATATGAGAAAGAAATAAAATCTTCCCATCTATGGATAGCGTTTTGGAAAATTGAAGAGGAAAACAGAGGTGAACTATCAAGGAATTACAGTGAGATTCGCTTGAAATTTTGTACTGGCTGGGAACAGCCTCCATTAAGATTGGTTGATGTAGAGTCAATCAAGTGTGGATGGCGTTTCATTCGCGAAGGTGATTTAGAACGACTCTAG 3285 0.3936 MGNNKEAFSSESSRSNPTRRTWKYDVFLSFRGEDTREGFTSHLYQALDGRGFHVFIDYGLTRGEVISQELLQAIEESRFAIVVLSENYASSFWCLDELQHILTSRNNSDQIVFPVFYRVHPPDVMNQRGIFGEAFAKLARGQPQSKVKKWRDSLTEVAHLAGFDTRNYRDEAALIMDVVENLWGQLRSVLPPVKAHSDALVGIEPRVDEMLSISGIGLDDVRFIGIWGMGGVGKTTLARVIYETLHHLFDFPCFLANVREVSAERNGILRLQKQLLSHFNVKDLHIEDTYEGQNMLGYLLRNRKVLLVLDDVSDLGQLRSLARSRKWFGDGSRIFITTRDLDLLTCHEVDETYEITPMTDAESLQLFYQKAFGGRGVPANEDQFWQLARSAIGYAHGLPLALCVLGSFLCGRDDLTEWEDALQLWGKDEIIQILAGCGLPAPASLGSLRKKSLLAEIEIGGTTYVEMHDLIQEMGRLIVIEESPVIVGRRSRLWLPNDIDQLMESDMGTEATEGMVLPHSFEKDEVDWNPEAFLKLCSLQMLIISSNFNLSLPFRGLPRILKVLHWYGYPMESLPSNVKMDQIRYLKMHNSKIKRLSNDKQSMKKLKILDLSHSKYLLQTPNFVGYHNLKRLILEGCTSLVEIHSSLGQLHCLVEVNLKGCINLKVLPQKLEMDSLEKLVLCGCVRVRILPEFEENMEKLRTLDVKETSVTRLPKSLGYLTGIETLDLRGCQKLVGLPHDIHKLKRLKVLDISCCSNFSALPEKLNENEALEKLDASGTAIVEVPSSICHLKKLKALAFHGCKNPTSNSSVWSLLWSQMFQSHSSPKYLTLPASIFNIQSLTELDLSYCNIVDGIIPNELNGLSSLRTLDLSGNVFMNLPDGCISNLLNLQSFYLNSCPKLQFLPQPSPSLNLMDAGECGSLRTLSDRQLLHLFASIEQHAEELRRIKSFSVTIPGSEIPSWFENQNHLRLNEKREASVTIDMPEDEWLGIGLCTVIDDKICLPRLGFDFKASDGKYVSLQGRTREYEKEIKSSHLWIAFWKIEEENRGELSRNYSEIRLKFCTGWEQPPLRLVDVESIKCGWRFIREGDLERL 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2739g00001 1094 Gene3D - 358 435 IPR042197 -
Pral2739g00001 1094 Gene3D - 18 190 IPR035897 -
Pral2739g00001 1094 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 188 - -
Pral2739g00001 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 425 IPR027417 -
Pral2739g00001 1094 Gene3D - 196 352 IPR027417 -
Pral2739g00001 1094 ProSiteProfiles TIR domain profile. 22 186 IPR000157 GO:0007165
Pral2739g00001 1094 SMART LRR_typ_2 255 278 IPR003591 -
Pral2739g00001 1094 SMART LRR_typ_2 863 886 IPR003591 -
Pral2739g00001 1094 SMART LRR_typ_2 697 720 IPR003591 -
Pral2739g00001 1094 Pfam NB-ARC domain 220 423 IPR002182 GO:0043531
Pral2739g00001 1094 SMART till_3 23 160 IPR000157 GO:0007165
Pral2739g00001 1094 SUPERFAMILY L domain-like 467 808 - -
Pral2739g00001 1094 Pfam TIR domain 23 191 IPR000157 GO:0007165
Pral2739g00001 1094 SUPERFAMILY L domain-like 744 933 - -
Pral2739g00001 1094 Gene3D Ribonuclease Inhibitor 693 813 IPR032675 -
Pral2739g00001 1094 Pfam Leucine Rich Repeat 865 887 IPR001611 GO:0005515
Pral2739g00001 1094 Coils Coil 586 606 - -
Pral2739g00001 1094 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 163 IPR035897 -
Pral2739g00001 1094 Gene3D Ribonuclease Inhibitor 819 972 IPR032675 -
Pral2739g00001 1094 Gene3D Ribonuclease Inhibitor 525 692 IPR032675 -
Pral2739g00001 1094 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 687 IPR044974 GO:0006952
Pral2739g00001 1094 PRINTS Disease resistance protein signature 299 313 - -
Pral2739g00001 1094 PRINTS Disease resistance protein signature 601 617 - -
Pral2739g00001 1094 PRINTS Disease resistance protein signature 223 238 - -
Pral2739g00001 1094 PRINTS Disease resistance protein signature 395 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2739g00001 Pral-Chr2739 77715 82861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2739g00001 14 810 WRKY Transcription Factor Family AT4G12020 29.673 6.12e-84 298