Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2730g00008 ATGGAAGCTCTTCTGTGCAGAAAATTGGGTGATCCTACTGTGGCAGCACAAGATGATTCTAGCCCAATATTTGTCTCCAAAAACCACCCTATCCCTGAGTTGGATTCTCCCACTTCTGTAAGGGTTAGAATCAAAGCCACCAGCTTGAATTTTGCAAATTATTTGCAGATACTGGGTAAATATCAAGAGAAGGCTGCTTTGCCATTCATCCCAGGTTCCGATTTTTCTGGCTTCGTTGACTCCGTTGGCCCCAAAGTTTCCAACCTCAGAGTCGGAGACCCTGTTTGTTCCTTCGTTCCTCTTGGCTCTTTTGCTGAATTCATCGTTGTAGACCAGAGCCAACTGTTTCGCGTACCTGAAGGTTGTGATCTGGTTGCTGCCGGCGCCCTTCCAGTGGCTTTCGGTACTTCACACGTCGCACTCGTCCATAGAGCTGGATTGACCTCTGGTCAGGTATTGCTTGTTTTGGGTGCCGCAGGAGGTGTTGGCCTTGCAGCCGTACAAATTGGGAAAGCTTGCGGTGCCATTGTCATAGCTGTAGCTAGGGGAAGCGAAAAGGTGCAGCTCTTGAAATCACTTGGTACTGATCATGTGGTGGACTTGGCTTGTCAAAATGTCACTCAAAGTGTCAGAGAGTTTCTTAACGCTCGAAAGCTCAAAGGGGTCGATGTCCTGTATGACCCAGTTGGAGGCAAGCTTACTAAGGAGACTATGAAGCTTTTGAACTGGGGAGCTAACATTCTGATCATTGGGTTTGCAAGCGGAGAAATTCCTGTCATCCCTTCTAATATAGCTCTTGTAAAGAATTGGACAGTGCATGGTCTTTACTGGGGTAGCTATAAAATACATCGCCCGGCTGTTCTTGAAGACTCTGTTAGGGAGCTACTATCCTGGCTGGCAAGAGGCTTGATTTGTATCCACATTTCTCATTCTTACCGGCTCACAGAGGCCAACCTCGCCTTTGCTGCTATCAGAGATAGAAAAGCTATTGGGAAGGTGATGATTGTTTTTGATGAGAAACGTCCCATATCTAAGCTGTGA 1041 0.4697 MEALLCRKLGDPTVAAQDDSSPIFVSKNHPIPELDSPTSVRVRIKATSLNFANYLQILGKYQEKAALPFIPGSDFSGFVDSVGPKVSNLRVGDPVCSFVPLGSFAEFIVVDQSQLFRVPEGCDLVAAGALPVAFGTSHVALVHRAGLTSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGSEKVQLLKSLGTDHVVDLACQNVTQSVREFLNARKLKGVDVLYDPVGGKLTKETMKLLNWGANILIIGFASGEIPVIPSNIALVKNWTVHGLYWGSYKIHRPAVLEDSVRELLSWLARGLICIHISHSYRLTEANLAFAAIRDRKAIGKVMIVFDEKRPISKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2730g00008 346 SMART PKS_ER_names_mod 17 335 IPR020843 GO:0016491
Pral2730g00008 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Pral2730g00008 346 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Pral2730g00008 346 Gene3D - 35 331 - -
Pral2730g00008 346 Pfam Alcohol dehydrogenase GroES-like domain 38 96 IPR013154 -
Pral2730g00008 346 Gene3D - 133 280 - -
Pral2730g00008 346 SUPERFAMILY GroES-like 22 154 IPR011032 -
Pral2730g00008 346 CDD QOR1 1 335 - -
Pral2730g00008 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 288 IPR036291 -
Pral2730g00008 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2730g00008 Pral-Chr2730 24767 27997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2730g00008 65 266 Monolignol Biosynthesis Gene Families AT1G72680 24.686 4.62e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2730g00008 K00344 - gmx:100817700 577.4