Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2727g00001 ATGGAATCTGTCTCCACCCCTTATCGCATTGCAGAGGAGAATATTTGCACAAGTAAGAGCTTCGTCGGCCAACCGGTGGCACTCCCACCCAATGATTGGGTGAAAGTTAACGTAGATGGGGCTGTCTCTCATTCCAGAAACGTGGCTAGATGCGGAGGTGTAATTAGAGACTATAGAGGCCAATGGATTGTGGGATTTCACCAAACAATCGGAAGCTGCAGCGTGTTTGAAGCAGAGGAGTGGGCTATGTTTAAAGGCATCAGGTTAGCTTGGGACTCAGGTTTCAAGAAGGTTCTGTTAGAATCTGACTCCAAAACCTTGATTGATATGTTATTGAGTCCTGATGTCCATAACACGCGCAGCCTGATATTCTTGGAGATTCGTCGATTGATGGGTCTAAATTGGGAGATTGTCTTCAACCATATTCCTAGGCTCCAAAACCAGCTTGCTGATGCTCTTGCTAAGGAAGAACCCATCAAAGAAATGCCCGCCAAGTGTTTTTGTTGCTTCCTCCTACAAGCAGAAAACCAGCTAGTCAAAACAAGAAATGACAGCAAAAATAGGGAATATCCATGGGAAATGTACACGCTGAAGGAATTGCTCCGTGCAACAAACAATTTCCATCAAGATAACAAGATAGGAGAAGGTGGCTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGCGACTGAAGACGATGACTGCAAAAGCAGAAATGGAATTTGCAGTAGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACCTTTTGGGTCTAAGAGGATTCTACGCCGGAGGAGAAGAAAGACTTATTGTTTACGATTACATGCCCAATCATAGCTTGCTCACACATCTTCACGGCCACCTCGCTTCAAGTTGTCTCCTAGATTGGCCTAAAAGAATGAGCATCGCCATTGGAGCAGCTGAAGGCTTAGCGTATCTTCATCATGAGGCGAATCCTCATATCATACACAGGGATATAAAGGCAAGCAACGTTCTATTGAACACAGAGTTTGAAGCGAAAGTGGCTGATTTTGGTTTTGCGAAGCTAATACCAGAAGGTGTGAGCCATTTGACCACAAGGGTGAAAGGAACTTTGGGATATTTGGCGCCAGAATACGCCATGTGGGGGAAGGTTTCAGAGAGCTGTGATGTGTACAGTTTTGGGATTTTGCTTTTGGAGATTATTAGTGCGAAGAAACCGATAGAGAAGCTACCAGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACGCCTTACGTTCAAAAGGGTATCTTCAATCATATTGCAGATCCAAAGTTGAAGGGTAAGTTTGACTTGGAGCAGTTGAAATCTCTGGTGATGCTGGCTGTGAAGTGCACCGATAGTAGCCCGGAGAAGCGGCCGAGTATGGCGGAGGTGGTGGAGTGGCTCAAGGGCGCCGGAGGCGGAGGTGGGAGGAGGAGAAAAGAGATTCCGCCGGCAGCTATGAGGGATGAAGAAAATGACAGGAATGATAAGGACTACGAAGACATGGGAAAGAGGCTAACAGAAAAGTCTCATTTGACCGTTACCTTGCTGATTCAGCGCAAGCGTCGGATGTGTATTATTTTGACTAAAACTCCCGAGACGAGCCCGGTGGCGGCGGGTGTTTTCTCGGAAGGCAACGACGATGTCGATGGAGTGACCAAGGGAAAGTTTACTGTGTTCTACGAGGAGGAAAGCAAATGCGAGTCAAATGAGGAGTCAACAGAGATGAAGATGGAAGTGTGCTATGACAGCAGTTGTGGTTTCAAATCGGAATGGTAG 1809 0.4638 MESVSTPYRIAEENICTSKSFVGQPVALPPNDWVKVNVDGAVSHSRNVARCGGVIRDYRGQWIVGFHQTIGSCSVFEAEEWAMFKGIRLAWDSGFKKVLLESDSKTLIDMLLSPDVHNTRSLIFLEIRRLMGLNWEIVFNHIPRLQNQLADALAKEEPIKEMPAKCFCCFLLQAENQLVKTRNDSKNREYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGHLASSCLLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLNTEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGVKRDIVQWVTPYVQKGIFNHIADPKLKGKFDLEQLKSLVMLAVKCTDSSPEKRPSMAEVVEWLKGAGGGGGRRRKEIPPAAMRDEENDRNDKDYEDMGKRLTEKSHLTVTLLIQRKRRMCIILTKTPETSPVAAGVFSEGNDDVDGVTKGKFTVFYEEESKCESNEESTEMKMEVCYDSSCGFKSEW 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2727g00001 602 Gene3D Phosphorylase Kinase; domain 1 171 282 - -
Pral2727g00001 602 ProSitePatterns Protein kinases ATP-binding region signature. 213 235 IPR017441 GO:0005524
Pral2727g00001 602 MobiDBLite consensus disorder prediction 483 506 - -
Pral2727g00001 602 FunFam PTI1-like tyrosine-protein kinase At3g15890 283 490 - -
Pral2727g00001 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Pral2727g00001 602 Gene3D - 32 157 IPR036397 GO:0003676
Pral2727g00001 602 Pfam Reverse transcriptase-like 37 156 IPR002156 GO:0003676|GO:0004523
Pral2727g00001 602 FunFam PTI1-like tyrosine-protein kinase At3g15890 179 282 - -
Pral2727g00001 602 MobiDBLite consensus disorder prediction 482 506 - -
Pral2727g00001 602 ProSiteProfiles RNase H type-1 domain profile. 30 159 IPR002156 GO:0003676|GO:0004523
Pral2727g00001 602 PANTHER OS01G0253100 PROTEIN 177 480 - -
Pral2727g00001 602 SMART serkin_6 207 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2727g00001 602 SUPERFAMILY Protein kinase-like (PK-like) 189 480 IPR011009 -
Pral2727g00001 602 SUPERFAMILY Ribonuclease H-like 32 157 IPR012337 -
Pral2727g00001 602 CDD RNase_H_like 36 155 IPR044730 -
Pral2727g00001 602 Gene3D Transferase(Phosphotransferase) domain 1 283 482 - -
Pral2727g00001 602 Pfam Protein kinase domain 207 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2727g00001 602 ProSiteProfiles Protein kinase domain profile. 207 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2727g00001 Pral-Chr2727 10657 29991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2727g00001 195 509 Receptor kinase-like Gene Family AT1G60800 42.202 1.80e-80 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pral2727g00001 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2727g00001 - - gmx:100815397 595.119