Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2716g00006 ATGGCTCTCCCTCCTGCAAAATCACACCTCTTACTCTTTTCATTATTCTCCCTTCTCTTCATCATCCATGCCAAAATTGATATCGATCCTTCAGATCTCAAAGCTTTCTTGACTTTTCAGAAGCAGTTGGGTTTCAACGGTCAACTCCACCCATTGACCGCCCACCCATGTAACACCGACGGTGTTTTCTGCGAGAGGAGGCTTTCCAGTAATGAGAGCTATGCTCTCAGAATCACCAGAATCATCTTCAAGTCTAAGAAGCTTAATGGTGTTCTGTCCCCAGCGATTGGGCGTCTCTCTGAGCTCAAGGAGCTTTCTCTTTCGGATAACCAACTCGTGAGCCAGATTCCAGCTCATATAGTTGACTGCCGGAAGCTGGAAGTTCTTGACCTCGGAAACAACCACTTCTCCGGCGAGGTCCCGTCTGAATTGTCCTCCCTCATTCGCCTTCGAGTCCTTGACATATCTTCCAACAAATTTTCTGGGAATTTGAATTTCCTGAAGTACTTCCCCAACCTGGAAAGTCTCTCCGTGGCGGACAATCTCTTCACGGGGAGAATTCCGGCATCCATACGTTCATTTCGCAATCTCCAACGCTTCAACTTTTCTGGGAATCACTTCCATGAAATTCCCGGGCCATTGATGAAGAGATTTGGACACTCAGCATCTGATATCCCCAGAAGATACATCCTTGCTGAGAATTCAGCTCCAACAACAAGTGAGGGAACTTCTGCTTATGCTCCAAAATCCAGTAGGAACCATTCTAATCATTCAGGGGCTCAAGCTTCTCCAGCTCCAGCTCCAACAGCGCATCACGAACACAAGGAAAAAAGGAGGAAACTAGGTGGGTGGATTCTCGGATTCCTAGCAGGAGCATTCGCTGGGAGCATATCGGGGTTAATATTTTCTTTGCTGTTTAAGTTGGCCGTCGCTGTGCTCAAAGGTGGAGGGAAGAGCACAGGCCCTGCAATTTATAGTCCATTGATTGCAAAGGCAGAGGACTTGGCTTTCCTGGAGAAAGAAGATGGAGTGAGTTCATTAGAAATGATTGGAAAAGGTGGCTGTGGAAAAGTTTACAAGGCTGAATTACCAGGAAGCAACAAACTTGTTGCTATAAAGAAGGTCAAGCAACCTCCAAAAGATGCAGTCGAACTGTCTGAAGAAGACAGTAAGATTCTGAACAAAAAAATGCGTCAAATTCGCTCGGAGATCAACACGGTTGGTCAAACTCGACATCGAAACCTTCTACCTCTGCTAGCTCACGTGTCAAGGCCGGATTGCCACTACCTTGTATATGAGTACATGAAGAACGGAAGCTTACAAGATGTGCTGAATCAAGTTCAAGCAGGCGTAAGAGAGTTAGATTGGTTAGCACGTCACAAGATTACAGTTGGCGTAGCAGCTGGCCTCGAGTACCTTCACATGCACCATACTCCTCGTATAATTCACAGAGATCTCAAGCCCGGAAATATTCTTCTTGATGATGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGAACCTTATACCCATGTCTCAACTTCAAATGTGCCAGGAACGATGGGTTACATAGCACCAGAATATCACCAAACACTGAAATTCACTGACAAGTGCGACATATACAACTTTGGGGTTGTTCTTGGCATCTTGGTGATGGGAAAGATTCCATCTGATGCGTTCTTTCAGGAAACAGAGGAGCTGAGTTTGGTGAAGTGGATGAGGAATGTGATGACTTCAGCCAATCCTACTAGGGCCATTGATGAAAAGCTCTTAGGCAATGGATATGAAGAGCAGATGCTTCTGGTTCTCAAGATTGCTTGCTTTTGTACTCTTGATGATCCCAAGGAGAGACCTAACAGTAAGGATATCAGATGCATGTTGTCCCAAATCAAACACTGA 1914 0.4551 MALPPAKSHLLLFSLFSLLFIIHAKIDIDPSDLKAFLTFQKQLGFNGQLHPLTAHPCNTDGVFCERRLSSNESYALRITRIIFKSKKLNGVLSPAIGRLSELKELSLSDNQLVSQIPAHIVDCRKLEVLDLGNNHFSGEVPSELSSLIRLRVLDISSNKFSGNLNFLKYFPNLESLSVADNLFTGRIPASIRSFRNLQRFNFSGNHFHEIPGPLMKRFGHSASDIPRRYILAENSAPTTSEGTSAYAPKSSRNHSNHSGAQASPAPAPTAHHEHKEKRRKLGGWILGFLAGAFAGSISGLIFSLLFKLAVAVLKGGGKSTGPAIYSPLIAKAEDLAFLEKEDGVSSLEMIGKGGCGKVYKAELPGSNKLVAIKKVKQPPKDAVELSEEDSKILNKKMRQIRSEINTVGQTRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQAGVRELDWLARHKITVGVAAGLEYLHMHHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEPYTHVSTSNVPGTMGYIAPEYHQTLKFTDKCDIYNFGVVLGILVMGKIPSDAFFQETEELSLVKWMRNVMTSANPTRAIDEKLLGNGYEEQMLLVLKIACFCTLDDPKERPNSKDIRCMLSQIKH 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2716g00006 637 SUPERFAMILY Protein kinase-like (PK-like) 339 632 IPR011009 -
Pral2716g00006 637 Pfam Protein kinase domain 346 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2716g00006 637 FunFam Leucine-rich repeat receptor protein kinase EMS1 70 167 - -
Pral2716g00006 637 Gene3D Ribonuclease Inhibitor 165 221 IPR032675 -
Pral2716g00006 637 FunFam Leucine-rich repeat receptor-like protein kinase 435 637 - -
Pral2716g00006 637 Gene3D Ribonuclease Inhibitor 31 164 IPR032675 -
Pral2716g00006 637 Coils Coil 383 403 - -
Pral2716g00006 637 Gene3D Transferase(Phosphotransferase) domain 1 439 637 - -
Pral2716g00006 637 MobiDBLite consensus disorder prediction 237 263 - -
Pral2716g00006 637 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Pral2716g00006 637 Gene3D Phosphorylase Kinase; domain 1 344 438 - -
Pral2716g00006 637 MobiDBLite consensus disorder prediction 237 276 - -
Pral2716g00006 637 ProSiteProfiles Protein kinase domain profile. 344 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2716g00006 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Pral2716g00006 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 67 636 - -
Pral2716g00006 637 SUPERFAMILY L domain-like 44 211 - -
Pral2716g00006 637 SMART serkin_6 344 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2716g00006 Pral-Chr2716 64534 66761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2716g00006 1 637 Receptor kinase-like Gene Family AT2G31880 60.923 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pral2716g00006 Pkinase 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2716g00006 - - qsa:O6P43_022621 947.192