Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2714g00001 ATGAACACATTTTCACATGTTCCTCCGGGGTTTCGATTCCATCCCACTGACGAAGAACTCGTTGATTACTACCTCAGAAAGAAGATAGCTTCCAAAAGGATTGATCTCGACGTCATCAAGGATGTTGATCTGTACAAAATTGAGCCATGGGATCTTCAAGAATTATGCAGAATAGGAAGCGAGGAACAGAATGAATGGTACTTCTTCAGCCACAAAGATAAGAAGTATCCGACAGGAACACGAACGAACAGAGCCACAAAAGCAGGATTCTGGAAGGCGACTGGAAGAGATAAAGCGATCTATTCAAGGCATTTTCTGATTGGTATGAGAAAGACTCTTGTGTTTTACAAAGGACGAGCCCCTAATGGACAGAAATCTGACTGGATCATGCATGAGTATCGCCTTGAAACTAATGAAAATGCAACCCCTCAGGAAGAAGGGTGGGTGGTGTGTAGAGTGTTCAAGAAGCGAATGACGACAATGAGAAAGGTAGGAGAATATGAATCACCATGTTGGTACGAGGAGGCAGCCTCGTTCATGCAAGAACTCGATCAATCTCCTCCAAGGCGTAATAGTAATAACAATATTTCTCCACCTTACTACTCCTGCAAGCAAGAGTTTGATCAATTCCAATACAACATCAATAATCTTCCCCACGATGCTTTCCTCCAGCTTCCTCAGCTTGAAAGCCCTAAACTCCCCATCTTCAGCAGCAACGCCTTCGACCATCATCAATATCAACACTGCAGAAACAACCATGGAGCCGCCGCCTCAGCCGCCGCCACGACGGCGTCGTTTTACGATCAACCAGTTGTTTTGGATCATAATGATCAAGCGGTAATTACTGACTGGAGGGTGTTTGATAAATTTGTTGCTTCTCAGCTGAGTCAAGATCATCACCAGCAACAACATGGTGCTTCCAAGGAAACCAGTAATGCCGATGACGTTGTTGCCGTCACTGAACAAGTTCCTATGCTGGAAAATCAGTCAACAACAACGAGGTCGCCGTCGGAGTTGGAGCAGGAATTTGCATCGGCGTCCACCACCACCACCTGCAACATTGAACTATGGAAGTGA 1077 0.454 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQELCRIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHFLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTMRKVGEYESPCWYEEAASFMQELDQSPPRRNSNNNISPPYYSCKQEFDQFQYNINNLPHDAFLQLPQLESPKLPIFSSNAFDHHQYQHCRNNHGAAASAAATTASFYDQPVVLDHNDQAVITDWRVFDKFVASQLSQDHHQQQHGASKETSNADDVVAVTEQVPMLENQSTTTRSPSELEQEFASASTTTTCNIELWK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2714g00001 358 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Pral2714g00001 358 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 288 - -
Pral2714g00001 358 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Pral2714g00001 358 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Pral2714g00001 358 FunFam NAC domain-containing protein 16 160 - -
Pral2714g00001 358 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Pral2714g00001 358 MobiDBLite consensus disorder prediction 324 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2714g00001 Pral-Chr2714 4689 9027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2714g00001 1 356 NAC Transcription Factor Family AT1G62700 52.683 1.85e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2714g00001 NAM 8.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2714g00001 - - tcc:18606319 458.759