Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2713g00006 ATGGCGACGGAGCAGTTGATGTCCGGTGGTGGTGGTCCCCGCTACGTTCAAATGCAATCGGAGCCATCGGCGGCGATTTCTTCTTCTGCGTCGGTCCGGTTTGGCGGTGGCCCTGAGCATACTCGAATTTTCGATGAGTTGCCAGAAGCCACCATCGTCTCCGTCTCTCGTCCCGATGCCGGCGACATCAGTCCCATGCTTCTGTCTTACACAATAGAGTTTCGTTATAAACAGTTCAAGTGGCAATTGGTGAAGAAGGCTTCTCAAGTATTTTATTTGCATTTTACATTGAAGAAACGTGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTAACAATCTAGGAATAGGAGAACACACTGCTGTGGTGCAAGATGATGATGAAGCTGATGATGAAACTGTTCATCTGCATCATGATGAAAGTGCGAAGGACAGAGATGTCCCATCTAGTGCTGCCCTACCAATTATACGGCCAGCCTTAGGAAGACAGGATACTATGTCAGACAGAGCAAAGACTGCAATGCAAGGATATTTGAATCACTTTTTAGGAAATATCAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTCACAACCGAGTATGGCCCTAGCCTGAAGGAAGATTATGTCATGGTGAAGCATCTGCCAACACTTCCTAAGGGTGATGATTCCAGAAAGTGTTGTTTATCTCGGTGTTTTAGTTGTTGCAATGACAACTGGCCTAAGGTTTGGGCTGTCTTAAAACCTGGATTCTTGGCATTGCTGGCCGATCCATTTGATAGCCAACCTCTGGACATAATTGTTTTTGATGTTCTACCTGCCTCAGATGGGAATGGGGATGGTCGTTTATCACTGGCAAAAGAAATGAAGGAGAAAAATCCTTTACGCCATTCATTCAGGGTGACTTGTGGAAACCGGAGCATTAGGATTAGAGTGAAAAGTACTAGTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCGCCTGAAGGATGGTGTCATCCTCATCGCTATGGTTCATTTGCTCCGCCAAGAGGCTTGATTGAAGATGGAAGTCAGGCTCAGTGGTTTGTTGATGGCAGGGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGATGCAAAATCAGAGATATTTATATGTGGATGGTGGGTTTGCCCAGAACTGTATTTACGGCGTCCTTTTCATACGCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAAGCCAAGCAAGGGGTTCAGATCTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATTAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAAAATGTGAGGGTACTACGCTACCCTGATCACTTTTCTTCTGGTGTCTACCTGTGGTCACACCATGAAAAACTGGTAATTGTTGATCATCAGATTTGTTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACATCTGAACACAAAGTAGGAGATTCCCCTCCGATGATATGGCCAGGAAAGGACTATTATAACCCGAGGGAATCTGAGCCAAATTCATGGGAAGATGCAATGAAAGATGAATTGGATCGTGTAAAGTATCCTCGAATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAGCAAAGCTCCAAATGAGCAAGCAATTCCATTACTTATGCCTCAGCATCATATGGTTATCCCACACTACTTGGGAAGAAGCAAAGAGATGGAGATTGAAAGCAACAATACTGACTATTGTATAGGAATGAAGAGGGAAGATTCCTTTTCCTCATCCCAAGATATTCCTCTACTTTCACCTGAGGATTCTGGGGGGATGAATGCTTCTGTAGGAGACACTGGATTAAATGAGTTAAGTTCCTTCTTTCATCGCCTTGACCAGCCAACCAGGGTCAGCAACGGTCGTCCTTTCCCTTTCCGGAAGGCCAAAATTGAACCAATAGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTCTGTGGATCATCATGGGAAGATGCCTACGGATAGAGTAGCTCACGTTAGTGTACCTAATTCAGGTCCAGAATGGTGGGAGACACAAGAACGGGGCGACCAGGGAAGTTTTGCAGACGAATCTGGCCAAGTTGGTCCTCATGTTTCCTGCCGTTGTCAGGTCATCCGGAGTGTTAGTCAATGGTCTGCTGGAACTAGCCAAACAGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAGGCAGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACGAAATCGTGTTTTGGAAGCTTTGTATCGACGGATTATGCGAGCTTACCATGACAAAAAGCCCTTTAGGGTTATAATTGTCATACCACTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGCGGTGCAGCATCCGTCAGAGCAATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAATTCTATATTACATAATCTGTTAGAATTTCTCGGTTCGAAAATACATGATTACATCTCTTTCTATGGCCTTAGGGCATATGGTAAACTCTTTGATAGCGGTCCTGTGGCAACCAGCCAGGTTTATGTTCACAGTAAAATCATGATTGTTGATGACTGTACGACTTTGATCGGATCTGCTAATATCAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATCGGTGTAATTATAGAAGACAAAGAACTGATTGATTCGTTTATGGGTGGGAAATCACGGAAAGCAGGAAAATTCTCTCTAACTCTGCGGTTGTCATTATGGTCTGAACACTTAGGTCTGCAAGCAGGGGAGATCAATCGAATAATGGACCCAATTGCTGACTCGACATATAAGGATATTTGGATGGCAACAGCGAAGACAAATACTGCGATTTATCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGGCAAAGCACAACTCTCTGGAAAGAAAGAATTGGTCATAGTACCATTGATCTAGGAATAGCCCCAGAAAATTTAGAATCCTATCACGATGGAGGCGTCAAGAAAACTGACCCTTTGGAGAGATTGGATTCAGTGAAGGGTCATCTTGTTTCCTTCCCCTTGGAGTTCATGTGTCAAGAAAACCTAAGACCTGCTTTTAATGAAAGCGAATACTATGCTACTCAGGTTTTCCATTAA 3336 0.4353 MATEQLMSGGGGPRYVQMQSEPSAAISSSASVRFGGGPEHTRIFDELPEATIVSVSRPDAGDISPMLLSYTIEFRYKQFKWQLVKKASQVFYLHFTLKKRAFIEEIHEKQEQVKEWLNNLGIGEHTAVVQDDDEADDETVHLHHDESAKDRDVPSSAALPIIRPALGRQDTMSDRAKTAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFTTEYGPSLKEDYVMVKHLPTLPKGDDSRKCCLSRCFSCCNDNWPKVWAVLKPGFLALLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAKEMKEKNPLRHSFRVTCGNRSIRIRVKSTSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDAKSEIFICGWWVCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSEHKVGDSPPMIWPGKDYYNPRESEPNSWEDAMKDELDRVKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRSKAPNEQAIPLLMPQHHMVIPHYLGRSKEMEIESNNTDYCIGMKREDSFSSSQDIPLLSPEDSGGMNASVGDTGLNELSSFFHRLDQPTRVSNGRPFPFRKAKIEPIGPDTPMKGFVDDLDSVDHHGKMPTDRVAHVSVPNSGPEWWETQERGDQGSFADESGQVGPHVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYHDKKPFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLLEFLGSKIHDYISFYGLRAYGKLFDSGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDKELIDSFMGGKSRKAGKFSLTLRLSLWSEHLGLQAGEINRIMDPIADSTYKDIWMATAKTNTAIYQDVFSCVPNDLIHTRLAFRQSTTLWKERIGHSTIDLGIAPENLESYHDGGVKKTDPLERLDSVKGHLVSFPLEFMCQENLRPAFNESEYYATQVFH 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2713g00006 1111 SUPERFAMILY PH domain-like 249 341 - -
Pral2713g00006 1111 Gene3D Endonuclease Chain A 702 969 - -
Pral2713g00006 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 908 935 IPR001736 GO:0003824
Pral2713g00006 1111 SMART pld_4 908 935 IPR001736 GO:0003824
Pral2713g00006 1111 SMART pld_4 478 505 IPR001736 GO:0003824
Pral2713g00006 1111 FunFam Phospholipase 742 962 - -
Pral2713g00006 1111 Pfam PLD-like domain 781 957 IPR025202 -
Pral2713g00006 1111 Pfam Phospholipase D Active site motif 478 505 IPR001736 GO:0003824
Pral2713g00006 1111 CDD PLDc_vPLD1_2_yPLD_like_1 371 515 - -
Pral2713g00006 1111 PANTHER PHOSPHOLIPASE D 177 1101 IPR015679 -
Pral2713g00006 1111 Gene3D Endonuclease Chain A 365 601 - -
Pral2713g00006 1111 Coils Coil 99 119 - -
Pral2713g00006 1111 SMART PH_update 217 345 IPR001849 -
Pral2713g00006 1111 MobiDBLite consensus disorder prediction 675 696 - -
Pral2713g00006 1111 CDD PLDc_vPLD1_2_yPLD_like_2 768 952 - -
Pral2713g00006 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 478 505 IPR001736 GO:0003824
Pral2713g00006 1111 PIRSF PLD_euk 50 620 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pral2713g00006 1111 PIRSF PLD_euk 627 1111 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pral2713g00006 1111 CDD PH_PLD 194 341 - -
Pral2713g00006 1111 Gene3D - 245 343 IPR011993 -
Pral2713g00006 1111 SUPERFAMILY Phospholipase D/nuclease 748 958 - -
Pral2713g00006 1111 SUPERFAMILY Phospholipase D/nuclease 322 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2713g00006 Pral-Chr2713 48593 58186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2713g00006 1 988 Phospholipase D Gene Family (Wang group) AT3G16785 73.193 0.0 1397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2713g00006 K01115 - gmx:100780514 1924.83