Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2713g00001 CAACCGTCGGGTTCTAGTTCGACCATCGGAATTGTTGATAAACCTAATCTCTTTGGAGATTTGGTGAGCTCTGCAATCGGACAGAGTTCTAAGAGTAGCAATAATACTCCCATAAAATCGATTCCTGCCTCTAAGGCATCAGGTACTACAACGAACAAAAGCTCCTTTTCGATGGGAAATATGGCGGATGCTTTGCCTAAAACCAGTAACACGACGGCAAGTAGTGGAAGTTGGGGATCTTCCGGGTACAATAATACTAGCATGGGCACTAATAAGAGCCCAAATCTTGGTGGTCCTTCAATGCGAAATATGAATAGTGGTAGTTCAGCTGGAAGTGGAATGAATGTTAATAGAGATCCATTCAGCTCTTTGGCTGGATTTGGATCAAAACCATCTGGTAGTCTTAATTCAGCTGGAATGGCCACAAAAAATAATAAAGCCGAGGATGATGGTTTTGGAGACTTCCAGAATGCCTCCAAACCAGGCCCTACCGCATTCCCATCAAGTAGTTCTGCTGCAGAGAATTTCAGTTTTCCAGGATCTACCAATTTGAATCAGAGCCCTGTGCAGACATCTGCTGGTGGTGACCCTATAGACATCTTATTCTCATCTTCAGCTACGGCTGGAAGTGCTACTGCGACTTCGGAAGCATTTGCAGGAAATTCATCTTCTGAAATTGATGACTGTTTGGATTCTGAATTTGGTGGAGGAGGACATGATGTGGGTGGTACAACCACTGAGCTTGAAGGGCTTCCACCCCCTGCTGGGCTATCGGGTTCTACAGCAAAAGGTAAAGGGATGGACAATTACAAGCAAGGTCAGTTTGCAGACGCTATTAAGTGGTTATCTTGGGCCATCATCCTTCTTGAGAAAACGGAGGATAATGCTGGTATGGCAGAGGTGTTGTCATGCAGAGCCTCATGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCCGATTGTACAAAGGTACTAGAAAATGATGACACAAATGTATCTATATTGGTGCAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAAGCTTGGTGCGGAAGACCTGAGGAGTGTTCTGAAGATTGATCCTGGTAATAGGGTTGCAAGAAGTACCATTCATCGGCTTACAAAGCTGGCTGACTAG 1146 0.445 QPSGSSSTIGIVDKXPNLFGDLVSSAIGQSSKSSNNTPIKSIPASKASGTTTNKSSFSMGNMADALPKTSNTTASSGSWGSSGYNNTSMGTNKSPNLGGPSMRNMNSGSSAGSGMNVNRDPFSSLAGFGSKPSGSLNSAGMATKNNKAEDDGFGDFQNASKPGPTAFPSSSSAAENFSFPGSTNLNQSPVQTSAGGDPIDILFSSSATAGSATATSEAFAGNSSSEIDDWXLDSEFGGGGHDVGGTTTELEGLPPXPAGLSGSTAKGKGMDNYKQGQFADAIKWLSWAIILLEKTEDNAGMAEVLSCRASCYKEVGEYKKAVADCTKVLENDDTNVSILVQRALLYESMEKYKLGAEDLRSVLKIDPGNRVARSTIHRLTKLAD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2713g00001 384 SUPERFAMILY TPR-like 266 376 IPR011990 GO:0005515
Pral2713g00001 384 MobiDBLite consensus disorder prediction 230 267 - -
Pral2713g00001 384 MobiDBLite consensus disorder prediction 20 202 - -
Pral2713g00001 384 MobiDBLite consensus disorder prediction 162 194 - -
Pral2713g00001 384 SMART tpr_5 262 295 IPR019734 GO:0005515
Pral2713g00001 384 SMART tpr_5 336 369 IPR019734 GO:0005515
Pral2713g00001 384 SMART tpr_5 302 335 IPR019734 GO:0005515
Pral2713g00001 384 MobiDBLite consensus disorder prediction 128 144 - -
Pral2713g00001 384 Pfam Tetratricopeptide repeat 338 368 IPR019734 GO:0005515
Pral2713g00001 384 PANTHER OS03G0340700 PROTEIN 3 384 - -
Pral2713g00001 384 Gene3D Tetratricopeptide repeat domain 262 383 IPR011990 GO:0005515
Pral2713g00001 384 MobiDBLite consensus disorder prediction 23 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2713g00001 Pral-Chr2713 13 1988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2713g00001 261 379 Calmodulin-binding Proteins AT3G25230 31.250 8.53e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2713g00001 - - pcin:129293443 619.387