Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2709g00006 ATGGGGAGAGAAAGAGAGGTGCCGAAGCAGCAACAGCAACAGGTGGGATACGCGGAGCAGCTTGTCGCCGTTAATCGCTATAATCCTGACATCCTTCCCGATCTCGAAAACCATGTCAACGAGCAGGTTTCATCACAAACGTACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTATCAGTTTGAACCAGAGAGAATGAGTTCTCAGATTGTAGCCCGCATATTGGTCAAGGCCCTCATGGCAATGCCAGCTCCGGACTTCAGCCTTTGTCTCTTTTTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACATTGATTGTTTTATCACACTATTTGGAGACAGGAAGATTTCGCCAGTTTTGGGATGAAGCAGCAAAGAATCGTCATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGGTTATGCAATTCATGTGCTCTCGTTAACTTACCAAAAGGTTCCTAGATCTGTGCTGGCTGAGGCCATCAACATAGAAGGCTTGGCCTTGGACAAATTCCTTGAACACCAAGTAGCTAACAGTGGTTGGGTCATTGAGAAAGGCCATGGCAAAGGTCAACTCATTGTCCTACCAAGAAATGAATTCAATGACCCAGCATCGAAGAAAAATGCTGCAGACAGCGTGCCATTGGAGCAAATTACGCGTATTTTCCCTATTCTGGGCTGA 702 0.4601 MGREREVPKQQQQQVGYAEQLVAVNRYNPDILPDLENHVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLALDKFLEHQVANSGWVIEKGHGKGQLIVLPRNEFNDPASKKNAADSVPLEQITRIFPILG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2709g00006 233 Gene3D - 129 231 IPR036388 -
Pral2709g00006 233 SUPERFAMILY ARM repeat 11 136 IPR016024 -
Pral2709g00006 233 FunFam Eukaryotic translation initiation factor 3 subunit K 129 232 - -
Pral2709g00006 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Pral2709g00006 233 Gene3D ARM repeat; domain 1 7 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Pral2709g00006 233 ProSiteProfiles PCI domain profile. 48 207 IPR000717 -
Pral2709g00006 233 FunFam Eukaryotic translation initiation factor 3 subunit K 10 126 - -
Pral2709g00006 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
Pral2709g00006 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 9 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Pral2709g00006 233 Pfam CSN8/PSMD8/EIF3K family 68 192 IPR033464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2709g00006 Pral-Chr2709 27371 30228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2709g00006 1 233 Eukaryotic Initiation Factors Gene Family AT4G33250 74.249 3.17e-126 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2709g00006 K15028 - qsa:O6P43_002615 416.387