Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00038 ATGTCGACTGGAGAGGTTGCTTGCACTTACGCGACTTTGATTCTTCACGATGATAACATCCCGGTCACTGCTGAGAAAATCTCAACCTTGGTGAAAGCTGCAAATGTTGATGTTGAATCTTACTGGCCAAGCTTATTCGCTAAGCTTGCTGAGAAGCGAGACATTGAGGATCTGATCTTGAATGCCGGAGGTGGTGGGGCTCCAGTTGTTGCTGCTGCTCCTGCTGCCGCTGGTGCTGGAGCTGCCCCTGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGAAGAACCCCAGGAAGAGAGTGATGACGACATGGGCTTCAGCTTGTTTGATTAG 336 0.5119 MSTGEVACTYATLILHDDNIPVTAEKISTLVKAANVDVESYWPSLFAKLAEKRDIEDLILNAGGGGAPVVAAAPAAAGAGAAPAAAPAAEEKKKEEPQEESDDDMGFSLFD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00038 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 111 - -
Pral2706g00038 111 FunFam 60S acidic ribosomal protein P1 1 63 - -
Pral2706g00038 111 Hamap 50S ribosomal protein L12 [rpl12]. 6 111 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pral2706g00038 111 MobiDBLite consensus disorder prediction 81 111 - -
Pral2706g00038 111 Pfam 60s Acidic ribosomal protein 22 110 - -
Pral2706g00038 111 CDD Ribosomal_P1 5 61 - -
Pral2706g00038 111 Gene3D - 1 63 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00038 Pral-Chr2706 200377 201543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00038 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 59.829 1.24e-41 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00038 K02942 - ini:109150052 134.035