Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00033 ATGATGTCTTCTCATGATTCTATCAACATGGCAATGAAATGCATATTAAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTACTATCAACCTTGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTGCTTCAGAAAACAATGCTGCCAGCAATCATTCAACTGGTTCTGTGGCTTCCACTCAGAAAAATAATGAATGCTGCGAGAAAAGGAGTGAGGCCCAAAGCACTTGTATATCGCCTATATTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATATGTCCCAGCCCAAGAGCTCTTCAAATTTGACCAACGTTGACACGGTGAAGCATGACGAGTCTGCAAAACTTGAAAGTAACTCTGCTAAACATAATAATGCAATTACGAAGAGGTCGATTATTTATTCATCAGAGGCTGCTAGGTGCAACAGCATTATTAACTTGACCAATTCAAGGCTGGAGCAAGACAATTGTGCTGAAAGAGATAATCGGGGTGAATCTTTAAGAGCAGAGTTTAATAGAGACAATCCTACTGTTGATACTGAGACTCATGGCTGCAAAAATGAATTGGTTGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTTGAGAATACTCCAAAGAATGTTGATGAGAATTATAGTCTCGCTGATGGTGGGAGAGACAAGTTTGATTTTGATCCGCAGCTGGAACTTTCCTTGAGAAATTTTTCTGGTAGCTCATGTGAAAAAGAACCTGAGGAAAGGCAAACATTGAACCATTCAGATGCATCCGCCTTTTCTTGGTATAGTGGTAATAAGTTGCCCCAGCCCCTTTTTCCCGTTTTACCAATGAGCTCTGCCAAAGCATATAGCACTGTTGCTTCTTATCAGCATGGTGGGACAAATCATGCTCAGGAGAACACAATCCCACTGGTTCTTCAGCAGACTGGACAAGTTGGAGTGCAATTGCCAAACCTCCATCCTGCATCCTCTCCTGCTACTGGTGTTACTTCTGATCATATGTTCAGCGGATATGGGAATGCTGTACCTTCTATATTCTACAGACAATCCGGTGCTCATCCCATGTGGAGTCCCAAATCAGTCGGCCGGAAAGAGAATTCTCCCTTTCGTGCAACCACTTCATTCCTGTCAAATGCTGAAAGTCACAACTCAGAACAACATTATCAGTGGTCCGATGCCAGCTGTGCTTCTCTTGATAAAAAGCCAGGGTGTGATAAAAGCTACTTGGATCCTACAATGCACGATTATCCAGGTACTTATCAGAATACCAGCATTAGTTTATGCCACGACACGCCAAACCGTGTTAATGATGGTTCATATGGAAGTATAGGCAGTACGAGAGATGGAGATCATACTTCAGCTGTGGTAATCGAGAAAACCTCTGAAAGCTTTAGTGATAACAGTTATCATGATTATGACGAATACAGAGGAGCAGATTCTCTGCGTCCCACCCAAAGGGAAGCTGCTCTAACAAAGTTTCGACTGAAGAGGAAAGACAGATGCTACGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGCATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAACGACTGTCCACTTGTTGATTCTGGCGGTGGTTCCTGA 1659 0.431 MMSSHDSINMAMKCILKGAADFLIKPVRRNVLSTLWQHVWRRHPKKLEAASENNAASNHSTGSVASTQKNNECCEKRSEAQSTCISPILEAESAYMQNMQDMSQPKSSSNLTNVDTVKHDESAKLESNSAKHNNAITKRSIIYSSEAARCNSIINLTNSRLEQDNCAERDNRGESLRAEFNRDNPTVDTETHGCKNELVEPSRGAIDLIATFENTPKNVDENYSLADGGRDKFDFDPQLELSLRNFSGSSCEKEPEERQTLNHSDASAFSWYSGNKLPQPLFPVLPMSSAKAYSTVASYQHGGTNHAQENTIPLVLQQTGQVGVQLPNLHPASSPATGVTSDHMFSGYGNAVPSIFYRQSGAHPMWSPKSVGRKENSPFRATTSFLSNAESHNSEQHYQWSDASCASLDKKPGCDKSYLDPTMHDYPGTYQNTSISLCHDTPNRVNDGSYGSIGSTRDGDHTSAVVIEKTSESFSDNSYHDYDEYRGADSLRPTQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPLVDSGGGS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00033 552 Pfam CCT motif 496 538 IPR010402 GO:0005515
Pral2706g00033 552 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 153 538 IPR045281 GO:0009909
Pral2706g00033 552 MobiDBLite consensus disorder prediction 49 69 - -
Pral2706g00033 552 MobiDBLite consensus disorder prediction 51 69 - -
Pral2706g00033 552 SUPERFAMILY CheY-like 1 52 IPR011006 -
Pral2706g00033 552 ProSiteProfiles Response regulatory domain profile. 1 40 IPR001789 GO:0000160
Pral2706g00033 552 Gene3D - 1 170 - -
Pral2706g00033 552 ProSiteProfiles CCT domain profile. 496 538 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00033 Pral-Chr2706 161152 165698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00033 1 94 Response Regulator Gene Family AT5G24470 41.284 7.55e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral2706g00033 CCT 7.1e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00033 K12130 - gmx:100779346 578.556