Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00030 ATGAGTATGCTCTCGGAGAATATGGGTGAAGCGGTCCTGCCTAGCGGTAAAAAGGGGATGGAGGTGAGGTTGGAGATAGAGGAGGAGATGAACACGATGAGCCAGCTGAAGGATGAGAGCTCCACAGAAATGGTTAACTGGGACAAGCTTCTTCCTCAGATGGTGCTCAGAGTTCTGGTGGTGGAAGCTGATGATTCTACTCGTCAGATTATCGCAGCCCTTCTCCGCAAATGTAGTTATAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAAACATTGAAGAAGAAAGCTCCTGATATTGATCTCATATTAACTGAAGTGGAGCTGCCGTCAATATCTGGATTTGCACTTCTTACTTTAATCAAGGAGCATGAAATCTGTAGAAATATTCCCGTCATAATGATGTCTTCTCATGATTCTATCAACATGGCAATGAAATGCATATTAAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTACTATCAACCTTGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTGCTTCAGAAAACAATGCTGCCAGCAATCATTCAACTGGTTCTGTGGCTTCCACTCAGAAAAATAATGAATGCTGCGAGAAAAGGAGTGAGGCCCAAAGCACTTGTATATCGCCTATATTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATATGTCCCAGCCCAAGAGCTCTTCAAATTTGACCAACGTTGACACGGTGAAGCATGACGAGTCTGCAAAACTTGAAAAGAGGTCGATTATTTATTCATCAGAGGCTGCTAGGTGCAACAGCATTATTAACTTGACCAATTCAAGGCTGGAGCAAGACAATTGTGCTGAAAGAGATAATCGGGGTGAATCTTTAAGAGCAGAGTTTAATAGAGACAATCCTACTGTTGATACTGAGACTCATGGCTGCAAAAATGAATTGGTTGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTTGAGAATACTCCAAAGAATGTTGATGAGAATTATAGTCTCGCTGATGGTGGGAGAGACAAGTTTGATTTTGATCCGCAGCTGGAACTTTCCTTGAGAAATTTTTCTGGTAGCTCATGTGAAAAAGAACCTGAGGAAAGGCAAACATTGAACCATTCAGATGCATCCGCCTTTTCTTGGTATAGTGGTAATAAGTTGCCCCAGCCCCTTTTTCCCGTTTTACCAATGAGCTCTGCCAAAGCATATAGCACTGTTGCTTCTTATCAGCATGGTGGGACAAATCATGCTCAGGAGAACACAATCCCACTGGTTCTTCAGCAGACTGGACAAGTTGGAGTGCAATTGCCAAACCTCCATCCTGCATCCTCTCCTGCTACTGGTGTTACTTCTGATCATATGTTCAGCGGATATGGGAATGCTGTACCTTCTATATTCTACAGACAATCCGGTGCTCATCCCATGTGGAGTCCCAAATCAGTCGGCCGGAAAGAGAATTCTCCCTTTCGTGCAACCACTTCATTCCTGTCAAATGCTGAAAGTCACAACTCAGAACAACATTATCAGTGGTCCGATGCCAGCTGTGCTTCTCTTGATAAAAAGCCAGGGTGTGATAAAAGCTACTTGGATCCTACAATGCACGATTATCCAGGTACTTATCAGAATACCAGCATTAGTTTATGCCACGACACGCCAAACCGTGTTAATGATGGTTCATATGGAAGTATAGGCAGTACGAGAGATGGAGATCATACTTCAGCTGTGGTAATCGAGAAAACCTCTGAAAGCTTTAGTGATAACAGTTATCATGATTATGACGAATACAGAGGAGCAGATTCTCTGCGTCCCACCCAAAGGGAAGCTGCTCTAACAAAGTTTCGACTGAAGAGGAAAGACAGATGCTACGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGCATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAACGACTGTCCACTTGTTGATTCTGGCGGTGGTTCCTGA 2031 0.4377 MSMLSENMGEAVLPSGKKGMEVRLEIEEEMNTMSQLKDESSTEMVNWDKLLPQMVLRVLVVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWETLKKKAPDIDLILTEVELPSISGFALLTLIKEHEICRNIPVIMMSSHDSINMAMKCILKGAADFLIKPVRRNVLSTLWQHVWRRHPKKLEAASENNAASNHSTGSVASTQKNNECCEKRSEAQSTCISPILEAESAYMQNMQDMSQPKSSSNLTNVDTVKHDESAKLEKRSIIYSSEAARCNSIINLTNSRLEQDNCAERDNRGESLRAEFNRDNPTVDTETHGCKNELVEPSRGAIDLIATFENTPKNVDENYSLADGGRDKFDFDPQLELSLRNFSGSSCEKEPEERQTLNHSDASAFSWYSGNKLPQPLFPVLPMSSAKAYSTVASYQHGGTNHAQENTIPLVLQQTGQVGVQLPNLHPASSPATGVTSDHMFSGYGNAVPSIFYRQSGAHPMWSPKSVGRKENSPFRATTSFLSNAESHNSEQHYQWSDASCASLDKKPGCDKSYLDPTMHDYPGTYQNTSISLCHDTPNRVNDGSYGSIGSTRDGDHTSAVVIEKTSESFSDNSYHDYDEYRGADSLRPTQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPLVDSGGGS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00030 676 MobiDBLite consensus disorder prediction 184 204 - -
Pral2706g00030 676 SMART REC_2 56 171 IPR001789 GO:0000160
Pral2706g00030 676 Gene3D - 54 305 - -
Pral2706g00030 676 CDD psREC_PRR 58 161 - -
Pral2706g00030 676 SUPERFAMILY CheY-like 56 187 IPR011006 -
Pral2706g00030 676 Pfam CCT motif 620 662 IPR010402 GO:0005515
Pral2706g00030 676 PANTHER TWO-COMPONENT RESPONSE REGULATOR 56 337 IPR045279 GO:0009736
Pral2706g00030 676 Pfam Response regulator receiver domain 58 168 IPR001789 GO:0000160
Pral2706g00030 676 ProSiteProfiles Response regulatory domain profile. 57 175 IPR001789 GO:0000160
Pral2706g00030 676 MobiDBLite consensus disorder prediction 186 204 - -
Pral2706g00030 676 ProSiteProfiles CCT domain profile. 620 662 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00030 Pral-Chr2706 161152 166191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00030 619 665 Response Regulator Gene Family AT5G24470 91.489 5.31e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral2706g00030 Response_reg 1.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00030 K12130 - gmx:100779346 712.605