Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00021 ATGGAGAGGATTCAAGGACCCATCAATTCCTGTTTCTTTGGTGAGCATTTGGGAGTAAACTACTTCGAGCAAGGTCTGATTGAGAACGAGGATGAAGAAGAACTTTTGATATCACTATCGAATTTGGAGGATAGAATGCCATTTCTTGAGATGCTTCAGAGTGTGGAATCTCAAACCCCACAGCTTTTTCCCTTCAAAGACTCCACCTTTCAGTTTCAGACACTTGTAAACCAGAAGAAACCATGCGAAGAAGAGAGGAAAAAAACGTGCGTATCTAGAACAATAGAGACTCAAATTTACGCGCCACCAGAGCTAGAGAGCTGCGTCACCCACGATACGGTGGAGATGCCTTCGCGGTCGCCGGCGAAATCTGAGAACTGTAGGAGAAAGAGGAAGAGAACGAGACCAATCAAGAGCAAGGAAGAGGTGGAGAATCAACGCATGACCCACATAGCCGTTGAACGCAACCGCCGCCGTCAAATGAACGACCACCTTGGTGTTCTCAAATCACTCATGCCCCCTTCCTATGTTCAAAAGGGGGACCAAGCGTCCATCATTGGAGGTGCAATAGACTTTGTGAAGGAATTGGAGCAACTTCTTCAATCCCTGGAGGCACAGAAAAGAATGAGGTGGACCGATGAAATTGGATTCGGCTATGGGACGACGTCGTCATGCGGAGAAGAATCAAACTTCGGTGAAGAGGTGAAGGCAGAGAACAAGTCAGAGTTTGCAGAAATACAAGTAACTGTGATTCAAAACCATGTGAACCTGAAAGTTCAGTGCAAGAGAAGAACTGGGCAGTTGGTGAAGACCATAGTGGGTCTTGAGGATCTTAGGCTAACTATTCTGCACCTAAACGTAACCTCCTCGCAGGCCTCCGTTCTCTACTGTTTCAATCTCAAGGTAGAAGAAGAGTGTAAAGTAGTGACAGCAAGTGAAATTGCAGGAGCAGTGGAAGAGATGTTGAGGGCCATCAATGGAAGCTAG 987 0.465 MERIQGPINSCFFGEHLGVNYFEQGLIENEDEEELLISLSNLEDRMPFLEMLQSVESQTPQLFPFKDSTFQFQTLVNQKKPCEEERKKTCVSRTIETQIYAPPELESCVTHDTVEMPSRSPAKSENCRRKRKRTRPIKSKEEVENQRMTHIAVERNRRRQMNDHLGVLKSLMPPSYVQKGDQASIIGGAIDFVKELEQLLQSLEAQKRMRWTDEIGFGYGTTSSCGEESNFGEEVKAENKSEFAEIQVTVIQNHVNLKVQCKRRTGQLVKTIVGLEDLRLTILHLNVTSSQASVLYCFNLKVEEECKVVTASEIAGAVEEMLRAINGS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00021 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 196 IPR011598 GO:0046983
Pral2706g00021 328 MobiDBLite consensus disorder prediction 114 146 - -
Pral2706g00021 328 CDD bHLH_AtFAMA_like 148 217 - -
Pral2706g00021 328 Gene3D - 135 214 IPR036638 GO:0046983
Pral2706g00021 328 SMART finulus 151 202 IPR011598 GO:0046983
Pral2706g00021 328 PANTHER MAX DIMERIZATION, MAD 107 325 - -
Pral2706g00021 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 210 IPR036638 GO:0046983
Pral2706g00021 328 Pfam Helix-loop-helix DNA-binding domain 146 197 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00021 Pral-Chr2706 143647 146477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00021 37 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 47.097 1.90e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2706g00021 HLH 1.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00021 - - pcin:129291729 500.745