Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00013 ATGGAATTGCTGATGCAAGATGTCAAAATGCATTCCCATGATATAGAAGAAGACGAGGAGGAGGAGGAGGAAGAAGCAGAGTTAGCTAGAGAGGAAAGCAGCAACAGTAAGAATTACCTTCATTTCTTACCAAATTTCGAAACTAGTACTCGTCGTCTTCATCATAATCATCATGATCCTCATCAAAATTCATGGCTGGGGCTTCATGATCATCACTCTCCAGATGCTGCTACAGCCAGCGAATCTCACAATTCACAGCCCGGATTAGGGTTAGCATCAGGACCGGCCACCAATTTCGCCGCTAATCACAGAAAGCTAGACCACATGGAGTTGTCACTGGGAGGAATTGGAACCGCCAAAGACGATGAAGAACAAGAAGGAGCTAATTTCCATGGAGGAGGAAGCAGCAGTAACGATGTTGGTGCTACTATTGAGAAAGAGCACATGTTCGATAAAGTCGTCACTCCCAGTGACGTAGGCAAGCTCAACCGTCTCGTAATACCAAAGCAACACGCAGAGAAGTACTTCCCTCTGGATTCCTCCTCCAACGAGAAAGGACTGCTCTTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCCTATTGGAACAGTAGCCAGAGCTATGTGATGACCAAAGGTTGGAGCCGCTTCGTCAAGGAGAAGAAGCTCGACGCCGGAGACATTGTCTCGTTTCACCGAGGCGCCGGAGAGTCGTATCGGCACCGGTTGTACATAGATTGGAGGCGTAGACCTGATCACGGCCCAGCCGGCCCTGATCCCAACTTGATTACACCTTTTCTTCTTCATCATCCCCATCAGCCGCAATTTTCTCAGTACTCTATCAGATGGGGCGGCCGACTGTTCTCGCTTCCCTCTCCGGCGCCGCCGCGACCACTGAACCATAGTAATATGTTTCCCTTATATCATCACCAGCAGCAACAAGAGCGACATCATCATCCGCGGCAGTACCAAGGCCATCATCATGATGCGATGAATTCAAGATCTGCAGGTTCGGTGTATTCGAACTTGATAGGGCAACAAGAAGTAAGAAATGTTCCGATGATTATAGATTCTGTTCCAGTTGATCATTATCATTCTCATCATCAAAACTATTACCATGGCAAAAATAGTAGTGCTACTAATACTACTGCTGGTAAAAGACTTAGGCTATTTGGGGTAAACATGGAATGTGCTTCTTCTTCGTCGTCTTCTTCATCACCATCAGTAGAAGAATCCAGATGTTGTAATGCGACAGTAATGGCTAATCCATCAATTTCCTCTTCGTCTTCTATTATCCCACCACCACCTCTTCATCAGTATCTGAGGTTACCCCATGCGGATCCAATTTCTTCGTCGTCATCGTTATCATCAGCAAGATTTCAGAGTCATCAGAAAGGGGAAACTTCGGTGCTTTTTGATTTGGATCCCTCTTTGCATTATAGGCAGTGA 1461 0.4661 MELLMQDVKMHSHDIEEDEEEEEEEAELAREESSNSKNYLHFLPNFETSTRRLHHNHHDPHQNSWLGLHDHHSPDAATASESHNSQPGLGLASGPATNFAANHRKLDHMELSLGGIGTAKDDEEQEGANFHGGGSSSNDVGATIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGAGESYRHRLYIDWRRRPDHGPAGPDPNLITPFLLHHPHQPQFSQYSIRWGGRLFSLPSPAPPRPLNHSNMFPLYHHQQQQERHHHPRQYQGHHHDAMNSRSAGSVYSNLIGQQEVRNVPMIIDSVPVDHYHSHHQNYYHGKNSSATNTTAGKRLRLFGVNMECASSSSSSSSPSVEESRCCNATVMANPSISSSSSIIPPPPLHQYLRLPHADPISSSSSLSSARFQSHQKGETSVLFDLDPSLHYRQ 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00013 486 Coils Coil 1 36 - -
Pral2706g00013 486 MobiDBLite consensus disorder prediction 1 15 - -
Pral2706g00013 486 FunFam B3 domain-containing protein 143 261 - -
Pral2706g00013 486 MobiDBLite consensus disorder prediction 450 465 - -
Pral2706g00013 486 ProSiteProfiles B3 DNA-binding domain profile. 150 253 IPR003340 GO:0003677
Pral2706g00013 486 MobiDBLite consensus disorder prediction 53 96 - -
Pral2706g00013 486 MobiDBLite consensus disorder prediction 316 337 - -
Pral2706g00013 486 MobiDBLite consensus disorder prediction 78 92 - -
Pral2706g00013 486 CDD B3_DNA 148 237 IPR003340 GO:0003677
Pral2706g00013 486 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 33 411 IPR044800 GO:0003700
Pral2706g00013 486 MobiDBLite consensus disorder prediction 53 68 - -
Pral2706g00013 486 SMART B3_2 150 255 IPR003340 GO:0003677
Pral2706g00013 486 SUPERFAMILY DNA-binding pseudobarrel domain 147 253 IPR015300 -
Pral2706g00013 486 MobiDBLite consensus disorder prediction 1 36 - -
Pral2706g00013 486 Pfam B3 DNA binding domain 150 254 IPR003340 GO:0003677
Pral2706g00013 486 Gene3D - 143 259 IPR015300 -
Pral2706g00013 486 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00013 Pral-Chr2706 50573 53731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00013 145 408 RAV Transcription Factor Family AT2G46870 53.676 9.51e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral2706g00013 B3 2e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00013 K09287 - gmx:100781424 372.859