Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00010 ATGGAATTGCTGATGCAAGATGTCAAAATGCATTCCCATGATATAGAAGAAGACGAGGAGGAGGAGGAGGAAGAAGCAGAGTTAGCTAGAGAGGAAAGCAGCAACAATGCTGCTACAGCCAGCGAATCTCACAATTCACAGCCCGGATTAGGGTTAGCATCAGGACCGGCCACCAATTTCGCCGCTAATCACAGAAAGCTAGACCACATGGAGTTGTCACTGGGAGGAATTGGAACCGCCAAAGACGATGAAGAACAAGAAGGAGCTAATTTCCATGGAGGAGGAAGCAGCAGTAACGATGTTGGTGCTACTATTGAGAAAGAGCACATGTTCGATAAAGTCGTCACTCCCAGTGACGTAGGCAAGCTCAACCGTCTCGTAATACCAAAGCAACACGCAGAGAAGTACTTCCCTCTGGATTCCTCCTCCAACGAGAAAGGACTGCTCTTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCCTATTGGAACAGTAGCCAGAGCTATGTGATGACCAAAGGTTGGAGCCGCTTCGTCAAGGAGAAGAAGCTCGACGCCGGAGACATTGTCTCGTTTCACCGAGGCGCCGGAGAGTCGTATCGGCACCGGTTGTACATAGATTGGAGGCGTAGACCTGATCACGGCCCAGCCGGCCCTGATCCCAACTTGATTACACCTTTTCTTCTTCATCATCCCCATCAGCCGCAATTTTCTCAGTACTCTATCAGATGGGGCGGCCGACTGTTCTCGCTTCCCTCTCCGGCGCCGCCGCGACCACTGAACCATAGTAATATGTTTCCCTTATATCATCACCAGCAGCAACAAGAGCGACATCATCATCCGCGGCAGTACCAAGGCCATCATCATGATGCGATGAATTCAAGATCTGCAGGTTCGGTGTATTCGAACTTGATAGGGCAACAAGAAGTAAGAAATGTTCCGATGATTATAGATTCTGTTCCAGTTGATCATTATCATTCTCATCATCAAAACTATTACCATGGCAAAAATAGTAGTGCTACTAATACTACTGCTGGTAAAAGACTTAGGCTATTTGGGGTAAACATGGAATGTGCTTCTTCTTCGTCGTCTTCTTCATCACCATCAGTAGAAGAATCCAGATGTTGTAATGCGACAGTAATGGCTAATCCATCAATTTCCTCTTCGTCTTCTATTATCCCACCACCACCTCTTCATCAGTATCTGAGGTTACCCCATGCGGATCCAATTTCTTCGTCGTCATCGTTATCATCAGCAAGATTTCAGAGTCATCAGAAAGGGGAAACTTCGGTGCTTTTTGATTTGGATCCCTCTTTGCATTATAGGCAGTGA 1344 0.4732 MELLMQDVKMHSHDIEEDEEEEEEEAELAREESSNNAATASESHNSQPGLGLASGPATNFAANHRKLDHMELSLGGIGTAKDDEEQEGANFHGGGSSSNDVGATIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGAGESYRHRLYIDWRRRPDHGPAGPDPNLITPFLLHHPHQPQFSQYSIRWGGRLFSLPSPAPPRPLNHSNMFPLYHHQQQQERHHHPRQYQGHHHDAMNSRSAGSVYSNLIGQQEVRNVPMIIDSVPVDHYHSHHQNYYHGKNSSATNTTAGKRLRLFGVNMECASSSSSSSSPSVEESRCCNATVMANPSISSSSSIIPPPPLHQYLRLPHADPISSSSSLSSARFQSHQKGETSVLFDLDPSLHYRQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00010 447 Coils Coil 1 36 - -
Pral2706g00010 447 MobiDBLite consensus disorder prediction 1 15 - -
Pral2706g00010 447 Pfam B3 DNA binding domain 111 215 IPR003340 GO:0003677
Pral2706g00010 447 Gene3D - 104 220 IPR015300 -
Pral2706g00010 447 MobiDBLite consensus disorder prediction 407 426 - -
Pral2706g00010 447 ProSiteProfiles B3 DNA-binding domain profile. 111 214 IPR003340 GO:0003677
Pral2706g00010 447 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 22 372 IPR044800 GO:0003700
Pral2706g00010 447 MobiDBLite consensus disorder prediction 277 298 - -
Pral2706g00010 447 CDD B3_DNA 109 198 IPR003340 GO:0003677
Pral2706g00010 447 MobiDBLite consensus disorder prediction 411 426 - -
Pral2706g00010 447 SUPERFAMILY DNA-binding pseudobarrel domain 108 214 IPR015300 -
Pral2706g00010 447 SMART B3_2 111 216 IPR003340 GO:0003677
Pral2706g00010 447 MobiDBLite consensus disorder prediction 32 53 - -
Pral2706g00010 447 FunFam B3 domain-containing protein 104 222 - -
Pral2706g00010 447 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00010 Pral-Chr2706 50573 53731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00010 106 365 RAV Transcription Factor Family AT2G46870 54.478 2.29e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral2706g00010 B3 1.7e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00010 K09287 - gmx:100781424 355.14