Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2706g00001 ATGGAGTCAAGTAAAGAGACGCCACCCCTCTCGCGCCTAGCTTGCTGTTTCAGGGTCAATGAATGGAATAGCCCCCAACACACCAAACTCCTCTTACCAGATTGGCCAATGACAGCCCCTATATATACCCATTCTTTTCATTTTTATCTGCCCTTTCAACATTTTCAAGAAAAAGTGATTCCCAAGATATCATCTGTCCTGATAACACAGAGATATTCCAGACAAATGCCAACCCCATCAAAATCATCATCAACAAGAACCTATGCCTCTCCATCTTCCATAAATATGGTTACGAGGTTAATGGCATTTTTCAGGGTACTATTAGTTCTGTCTTGCCTAGTTGCTGCATTCTCCTCCTCTTGTAACCAATTGGATAAAGAGTCTCTCTTGGCCTTCTCTAGCAACATATCCACGCTTTCCTCTCACCCTCCACTTAATTGGTCCACTTCTGTTGATTGCTGCTCCTGGGAAGGCATTCTCTGCGATGAGGGAAATACAGATAATGGGCATCGGCGAGTTATTGGTCTGTTACTTCCATCCAGAGGTCTCGCAGGTTCTATATCCCCATCTCTCATGAAACTCACTTGTCTCTCTAGGCTCAATCTATCCCACAATCGACTTTCTGGTAATCTTCCAACCCAATTTTTTTCACTCCTTAATCATTTGCAGATTCTTGATTTAAGCCACAATTATCTCTCAGATGAATTGCCGACCTTTGATATTAATAATACCAATACCAGTAGCACTATTATCCAAGAGCTAGATTTGTCTAGCAATCTATTTCAAGGAACACTCCCATCCTCTTTCCTTAAGTTCCTCAAAGCTGCAGCAGCAGCACGGACTTTGGCATATTTCAATGTTAGTGAAAACGGCTTCATAGGTCCAATTCCCATTTCTCAACTTTGCATTAATAAGACCAATTCGTCTATCAGATTCCTGGATCTTTCCTCAAACCATTTTAACGGCTCAATTCAACCAGGATTGGGTGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATTCTCTTTCTGGGCCTCTTCCTGGTGATCTTTTCGATGCTATTTCCCTTAGAGAGATCTCTTTACCCCTAAATCAACTCTCTGGAAATATTGATGATGGCATTTCTACCCTTACCAACCTCACAGTCCTGGAGCTCTACTCCAATGATTTCAGAGGATCCATACCACAAGGTATTGGTAAGTTATCCAAGCTGGAAAAGCTACTCCTTCATATAAATAATTTGACAGGTACTTTACCCCCATCTCTAGTGAACTGTGTCAATCTTGTCGTGTTAAATTTAAGGGTCAACCTCTTGGCGGGGAATCTTGGAGAATTTAATTTCTCTGGATTCCAACGGCTTACTAAACTTGATCTTGGCAACAATAATTTTACGGGCAATTTACCAAAAACCCTTTATGCATGCAAGTCACTGGCTGCAGTAAGGCTCACATCAAATCAGCTTGAGGGACAGATCACCCCAGATATACTTGGACTTAAGTCTTTGTCTTTCCTAGCATTATCTGCCAACTCCCTAAGAAATTTCACAGGAGCTATGAGAATACTCGCAGGCCTCAAGGACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACCATCCCGTATGATGAGAACTTGGTTGGCCGAGATGGATATCAAAAACTCCAAGTGCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCGGGCTGGCTTGCAAGGCTTAGGACGCTCGAGGTCATTGATATGTCCTATAATCTCATCTCTGGTTCAATTCCTCCTTGGTTGGGTAAACTTCCACAGCTATTCTACCTCGACTTGTCTCATAACCAACTTACAGGAGTATTTCCCACGGAACTCACAGGATTCCCAGCATTAACATCACAACAGGCAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGAACAATGCTTCTCAGCAGCAGTATAATCAGCTTTCAAATCTACCACCAGCAATATACATGAGAAACAATAGTCTCCTAGGCAATATTCCTCAGGAGATTGGCCTATTGAAAGTCCTGCATCAGCTGGATCTGGGTAATAACAACTTCTCTGGAAGTATTCCAGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCGACTATCTGGTGAAATTCCTGCTTCACTCAAAAGCCTGCATTTCTTGTCATTTTTTACAGTGGCAAACAATGATCTTCAAGGAGAGATACCAACAGGTGGCCAATTTCATACTTTTCCTCCTTCCAGCTTTGCAGGAAACCCACAATTGTGTGGTTCAGCTATACAACGCTCTTGTTATAGTCCATCAGGTAATAGAACAACTTTGAACCAAAAGACAAAATGGAACCAAAGTAAAATAATTGGAACTGTCATTGCACTTAGCTTTGCTGCCGTTTGTATCATCATTGTTTTTGCAATCTGGATACTTTTCAAGAGGAGAATCGCTCCAAGAGGAGATCCTGATGAGACTGAACAAGAATCAACTTTTGTAACCTATAACAATGGTTTTCATCCTGAAGTAGATAAGAAGGCTAGCCCAGTGATATTGTTCCCCAATAAAACAAGTGAAATCAAGGATCTTACTATATCTGAGATCTTGAAAGCCACTAAAAATTTCAGTCTAGCAAACATTATAGGATCTGAGGATTGTGGTTTAGTTTATAGAGCGACCTTACCGGATGGAAATAAACTAGCCATTAAGAAGCTTACAGGAGAATCACGGCTTACGAAAAGGGAATTTAGAGCAGAGGTAGAGGCTTTGTCAATAGCCCAACACGAGAATCTGGTAGCTGTGCAAGGTTATTGTGTGCATGATGGCTTTCGACTTCTCATATATAGTTTCATGGAAAATGGGAGCCTAGATTATTGGTTGCATGAGAAGCCTGATGGTGCAACTCAACTTGATTGGCCAACTCGATTGAAGATAGCACAGGGTGTGAGTTGCGGGTTGGCTTACATGCATCACACATGTGTACCACACATTGTGCATCGCAATATAAAACCAAGCAATATCCTCCTTGACGAAAATTTTGACGCACTCGTTGCTAATTTTGGGTTATCCCGATTGATTCTTCCTTCTCGCACCCATGTTACAACTGAAGTTGTAGGTACATTAGGTTATATTCCGCCTGAGTATGGACAAGCATCAGAGGCCACGCTTCGCGGAGATGTGTACAGTTTTGGCGTTCTCTTGCTTGAGTTGCTCAGTGGGAGGAGGCCTCTTGACATGTGCAAGACAAATATGTCAATGGAACTGGTTCTTTGGATGCAACAAATGATGAGTGAAGGAAAAGAAGATCAAGTCTTTGACCCACTTCTTACAGGAAAGGGCTTTGAAGATGAAATGTTGCAGGTACTTCATGTGGCTTGCATGTGCGTCAGCCACAATCCTTTCAAGAGACCAAACATCAGAGAAGTTGTTGATTGGCTGAAGAATGTAGGATCAGCCAAACAACACCACAATGAAGATTAG 3522 0.4179 MESSKETPPLSRLACCFRVNEWNSPQHTKLLLPDWPMTAPIYTHSFHFYLPFQHFQEKVIPKISSVLITQRYSRQMPTPSKSSSTRTYASPSSINMVTRLMAFFRVLLVLSCLVAAFSSSCNQLDKESLLAFSSNISTLSSHPPLNWSTSVDCCSWEGILCDEGNTDNGHRRVIGLLLPSRGLAGSISPSLMKLTCLSRLNLSHNRLSGNLPTQFFSLLNHLQILDLSHNYLSDELPTFDINNTNTSSTIIQELDLSSNLFQGTLPSSFLKFLKAAAAARTLAYFNVSENGFIGPIPISQLCINKTNSSIRFLDLSSNHFNGSIQPGLGACSKLEIFRAGFNSLSGPLPGDLFDAISLREISLPLNQLSGNIDDGISTLTNLTVLELYSNDFRGSIPQGIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVVLNLRVNLLAGNLGEFNFSGFQRLTKLDLGNNNFTGNLPKTLYACKSLAAVRLTSNQLEGQITPDILGLKSLSFLALSANSLRNFTGAMRILAGLKDLSSLVLSKNFYNETIPYDENLVGRDGYQKLQVLALGGCNFTGQIPGWLARLRTLEVIDMSYNLISGSIPPWLGKLPQLFYLDLSHNQLTGVFPTELTGFPALTSQQANDRIVRSYLELPVFIVPNNASQQQYNQLSNLPPAIYMRNNSLLGNIPQEIGLLKVLHQLDLGNNNFSGSIPVQISNLTNLEKLDLSGNRLSGEIPASLKSLHFLSFFTVANNDLQGEIPTGGQFHTFPPSSFAGNPQLCGSAIQRSCYSPSGNRTTLNQKTKWNQSKIIGTVIALSFAAVCIIIVFAIWILFKRRIAPRGDPDETEQESTFVTYNNGFHPEVDKKASPVILFPNKTSEIKDLTISEILKATKNFSLANIIGSEDCGLVYRATLPDGNKLAIKKLTGESRLTKREFRAEVEALSIAQHENLVAVQGYCVHDGFRLLIYSFMENGSLDYWLHEKPDGATQLDWPTRLKIAQGVSCGLAYMHHTCVPHIVHRNIKPSNILLDENFDALVANFGLSRLILPSRTHVTTEVVGTLGYIPPEYGQASEATLRGDVYSFGVLLLELLSGRRPLDMCKTNMSMELVLWMQQMMSEGKEDQVFDPLLTGKGFEDEMLQVLHVACMCVSHNPFKRPNIREVVDWLKNVGSAKQHHNED 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2706g00001 1173 Pfam Leucine rich repeat 557 616 IPR001611 GO:0005515
Pral2706g00001 1173 FunFam Leucine-rich repeat receptor-like protein kinase 965 1171 - -
Pral2706g00001 1173 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 349 444 - -
Pral2706g00001 1173 Gene3D Ribonuclease Inhibitor 307 353 IPR032675 -
Pral2706g00001 1173 Gene3D Ribonuclease Inhibitor 124 306 IPR032675 -
Pral2706g00001 1173 Pfam Leucine Rich Repeat 714 736 IPR001611 GO:0005515
Pral2706g00001 1173 ProSiteProfiles Protein kinase domain profile. 889 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2706g00001 1173 PRINTS Leucine-rich repeat signature 712 725 - -
Pral2706g00001 1173 PRINTS Leucine-rich repeat signature 606 619 - -
Pral2706g00001 1173 Gene3D Ribonuclease Inhibitor 354 448 IPR032675 -
Pral2706g00001 1173 Pfam Leucine rich repeat N-terminal domain 125 162 IPR013210 -
Pral2706g00001 1173 SMART LRR_typ_2 194 218 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 603 626 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 712 736 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 452 476 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 403 427 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 219 243 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 688 711 IPR003591 -
Pral2706g00001 1173 SMART LRR_typ_2 379 402 IPR003591 -
Pral2706g00001 1173 SUPERFAMILY Protein kinase-like (PK-like) 866 1160 IPR011009 -
Pral2706g00001 1173 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 357 1161 - -
Pral2706g00001 1173 ProSiteProfiles Leucine-rich repeat profile. 714 736 IPR001611 GO:0005515
Pral2706g00001 1173 SUPERFAMILY L domain-like 311 770 - -
Pral2706g00001 1173 SUPERFAMILY L domain-like 147 395 - -
Pral2706g00001 1173 Gene3D Ribonuclease Inhibitor 449 789 IPR032675 -
Pral2706g00001 1173 FunFam Tyrosine-sulfated glycopeptide receptor 1 449 786 - -
Pral2706g00001 1173 FunFam Leucine-rich repeat receptor-like kinase 127 250 - -
Pral2706g00001 1173 Gene3D Phosphorylase Kinase; domain 1 855 964 - -
Pral2706g00001 1173 Gene3D Transferase(Phosphotransferase) domain 1 965 1172 - -
Pral2706g00001 1173 Pfam Protein kinase domain 892 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2706g00001 Pral-Chr2706 6511 10717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2706g00001 81 829 Miscellaneous Gene Families AT1G17250 48.936 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral2706g00001 Pkinase 1.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2706g00001 - - pcin:129290895 1662.51