Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2705g00003 ATGAAGACAAGAAGCTTTGCTGCTGGCATAACTAAACCGAGTTCCCTACTGGCACAGACAAAAATGCCCATTTTAACGTTTTGTCATTCTAAGTCGATTCCTTCGTTAACTCTACAGCTACCTTGTAACTGCATGAGAAGAATGGGTTTGATTACGCAACTTAAGTGTTCTGTTGCTAATAGAACGTTGACTTCTAGCTCTGTAGCTTCACCCACATCCAAACCAGACTCCCCCCGCTTGAACAGGAAGCAAGGGCGTTCATCTTCATTGTATAGTCGTCCTAGTTTATCAGACATGAACAAAGAGAGGATGGCAAACCGTGAAAAGGTTTATGCATTCTTGCGGGGGATTGGTATTGTTCCTGATGAGCTTGATGGCCTGGAACTTCCAGTGACAGTCGAAGTTATGAGGGAACGAGTAGATTTTCTTCACAATTTAGGGCTTACAATTGAAGACATCAACAATTATCCGTTAGTTCTTGGCTGCAGTGTCAAAAAGAATATGATTCCCGTCCTTGATTACCTTGGTAAATTGGGAGTCAGGAAATCTACATTCACGCAGTTCTTGCGGAGATACCCACAAGTTCTTCATGCTAGTGTTGTTGTTGACCTCGAGCCAGTGGTCAAGTATCTTCAGGGGATGGATATCAAGCCCAATGATATTCCCCGGGTTCTTGAGACGTATCCAGAAGTGCTAGGATTTAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGCATTGGTGTTGGAAGAAGAGAAGTTGGAGGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAAAGTAATCAAGCCTTTTGTGGAATATCTGGAAAGCTTGGGGATTCCAAGATTAGCAATTGCAAGAATAATAGAGAAGCGACCTTATATTCTTGGCTTTGGATTGGACGAGAAGGTGAAGCCAAACATTGAAGCTCTTGAAGAGTTCGATATTAGAAGAGCATATCTACCCTCTGTCATTGCGCAGTACCCTGATATATTGGGAATGGACTTGAAGCCAAAGCTTGAGAATCAAAGTAATTTACTTAAATCTATGCTTGATTTGGATTCTGAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAGTGCGCCTATGTTAAAGCATGTTAATTTTCTTAAGGATTGTGGGTTTTCCTTGCAACAAATGAAGACGATGATTGTTGGATGCCCTCAACTTCTTGCCTTAAACATTGACATCATGCAACTTAGCTTTGGTTACTTTCAAAAGGAGATGGGGAGGCCTTTAGAAGACTTGGTTGCTTTCCCAGCCTTCTTTACGTATGGTCTGGAGTCAACTGTGAAACCCAGGCATAAGATGGTTGCCAAGAAGGGAGTGAAGTGTTCCCTTGCATGGATGCTTAATTGCTCGGATGACAAGTTTGAGCAACGAATGGATTATGACACTATTGACATGGAGGAAATGGAAATGGGACCATCATTTGACATGAATTCACTGATGGAGCCAAGGAGCGACGAGTCAGCTTCTGATTATGATGACAGTGATGATGATGATGGATAG 1575 0.4235 MKTRSFAAGITKPSSLLAQTKMPILTFCHSKSIPSLTLQLPCNCMRRMGLITQLKCSVANRTLTSSSVASPTSKPDSPRLNRKQGRSSSLYSRPSLSDMNKERMANREKVYAFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVVDLEPVVKYLQGMDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREVGGVLTRYPEILGMRVGKVIKPFVEYLESLGIPRLAIARIIEKRPYILGFGLDEKVKPNIEALEEFDIRRAYLPSVIAQYPDILGMDLKPKLENQSNLLKSMLDLDSEDFGRVVEKMPQVISLSSAPMLKHVNFLKDCGFSLQQMKTMIVGCPQLLALNIDIMQLSFGYFQKEMGRPLEDLVAFPAFFTYGLESTVKPRHKMVAKKGVKCSLAWMLNCSDDKFEQRMDYDTIDMEEMEMGPSFDMNSLMEPRSDESASDYDDSDDDDG 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2705g00003 524 MobiDBLite consensus disorder prediction 65 96 - -
Pral2705g00003 524 Pfam mTERF 172 480 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 PANTHER CGI-12 PROTEIN-RELATED 171 289 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 MobiDBLite consensus disorder prediction 65 100 - -
Pral2705g00003 524 FunFam Transcription termination factor mterf4, chloroplastic 136 273 - -
Pral2705g00003 524 Gene3D Transcription termination factor 3, mitochondrial 275 489 IPR038538 -
Pral2705g00003 524 Gene3D Transcription termination factor 3, mitochondrial 136 274 IPR038538 -
Pral2705g00003 524 FunFam Transcription termination factor MTERF4, chloroplastic 274 488 - -
Pral2705g00003 524 MobiDBLite consensus disorder prediction 496 524 - -
Pral2705g00003 524 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 87 120 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Pral2705g00003 524 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2705g00003 Pral-Chr2705 15796 18290 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral2705g00003 mTERF 6.6e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2705g00003 K15031 - qsa:O6P43_020032 791.571