Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2705g00002 ATGGGTGCGGCTGTCGACTGTGGTCCGCCGGGCGCTGATGAGGTGGCGGTTTTGCCTCTGAATTCCCTTCCTCTAGGTTTCAGGTTTCGGCCTACGGATGAGGAGCTGATCGATTACTATTTGCGACAGAAGATCAACGGAAATGGGGGAGAGGTATGGGTTATTCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTATCGGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGCAAATATCCAAATGGGAATCGATTGAACCGAGCAACGACTCATGGGTACTGGAAGGCAACGGGCAAAGATCGCAAAATTAAGTCTGGGTCGATCTTGATCGGAATGAAGAAGACTTTAGTGTTCTATATCGGTCGTGCTCCCAGAGGGAAGAGGACCAATTGGGTGATGCATGAGTACCGTCCTACCCTAAAGGAGCTTGATGGTACCAATCCTGGACAGAGTGCATATGTCCTTTGTCGTTTATTTAAGAAGCAAGATGAGACACTCGAAGGTTCAAACTGTGAGGGAAATGACTGTACCATGTCAACTCCACCAACTGCTAATTATTCTCCAGAAGAAATACAATCAGTTGTGGTTCAAGCAGCACCTTCTCCGTCGCTAGCTACTGAAGATGATAAGAACAGGGCAGTTCCATTCTATGTCTCTGAAAATTCTGAGGAAGCCACATCCAACATTATAACACCGATTGATTGCAACAGCGAAGAATGTGATACTTGTGATGCACAAAATAAGATTGTCATTCCAACGACTGCGGAGGAAGATCAGTTTTTCCTTGACATATTTTATGATCCAACAACTGAACCATTGGATGACAAGCTCTTCTCCCCCGTTCATCAGCATATCCCACCTGAGTTTTGTTTTTCTTCAAGCAATGAACTGGATAATGGCTTGCAACTTCAGTATGGTTCAAATGAGGTTAATGTGACTGAGTTTTTAAACTCAGTTGTCAACTGGGATGAGTTATCATATGATTCCAGCAGTCAAAAGCCCCCTTCCACCTTGGTTGATGCTAAGGATAATGGATCAGGCAGTGATTCAGATGTGGAAATGCCAAATATACTGAGTCTGCAAGCATTACATTCCATGAATCCTGATGAGGCAATTGACGCAAAGTCATCTTCAAAGTTGGATAAAACTTCAGATTTCCACAGCACCATCAGCTCTGAACTTATTGGTGATCAGAAGAGCCATATGGGATTGTTACAAAACAATTTTTCGATGGCCTCACCTGATGCTGGCGTGGGCCAATTGTCCACCGTTGACCATGGATCCAGGAATTATAATTCAGCTGATAATGATGATATCGGTACTGGCATCAGGATAAGGTCTCGGCAACTACGGAATGACATGCCAAACACAAACCTCAATAGCCAAGGTACCGCACCCAGGAGAATCAGGCTGCAGCGTAAACTTCAAGTGCACCCTCTTAGCTCCAGTGAGGTGATCGAAGGTGGGAGCTGCATAAAAGAGGACCTTGATTCAAAACCAATCATTGCAGGGGAGACAAAAGCTTCAGAAAATCACGCGCGTGATGTGGATGCTATGCATTCCAATGTTGTAGACGAACCCCAGAAGGCATCTCCTGAGTCAACTGACGATACAAAGACTCCTGAGCAACGTACTGCAGGTGCGGGGTCCTTCTTGAAGGTGAAAGACGTCAAAAGCTTGTGCACAAAGGCACGTTACACATCAAAAGCGCCCGTCAGACTCAAAATTTGGTCATCTGTTGTACTTTTTGTCATTGTACTGGTTCTATTAGTATTCTCAGCTAACGTGTGGGGGCATTCTAGAAGTTGA 1845 0.452 MGAAVDCGPPGADEVAVLPLNSLPLGFRFRPTDEELIDYYLRQKINGNGGEVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGNRLNRATTHGYWKATGKDRKIKSGSILIGMKKTLVFYIGRAPRGKRTNWVMHEYRPTLKELDGTNPGQSAYVLCRLFKKQDETLEGSNCEGNDCTMSTPPTANYSPEEIQSVVVQAAPSPSLATEDDKNRAVPFYVSENSEEATSNIITPIDCNSEECDTCDAQNKIVIPTTAEEDQFFLDIFYDPTTEPLDDKLFSPVHQHIPPEFCFSSSNELDNGLQLQYGSNEVNVTEFLNSVVNWDELSYDSSSQKPPSTLVDAKDNGSGSDSDVEMPNILSLQALHSMNPDEAIDAKSSSKLDKTSDFHSTISSELIGDQKSHMGLLQNNFSMASPDAGVGQLSTVDHGSRNYNSADNDDIGTGIRIRSRQLRNDMPNTNLNSQGTAPRRIRLQRKLQVHPLSSSEVIEGGSCIKEDLDSKPIIAGETKASENHARDVDAMHSNVVDEPQKASPESTDDTKTPEQRTAGAGSFLKVKDVKSLCTKARYTSKAPVRLKIWSSVVLFVIVLVLLVFSANVWGHSRS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2705g00002 614 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 247 - -
Pral2705g00002 614 FunFam Nac domain-containing protein 86 32 176 - -
Pral2705g00002 614 MobiDBLite consensus disorder prediction 532 559 - -
Pral2705g00002 614 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Pral2705g00002 614 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Pral2705g00002 614 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Pral2705g00002 614 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Pral2705g00002 614 MobiDBLite consensus disorder prediction 339 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2705g00002 Pral-Chr2705 8006 11725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2705g00002 15 506 NAC Transcription Factor Family AT4G35580 40.681 2.32e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2705g00002 NAM 2.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2705g00002 - - gmx:100778903 635.18