Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2704g00001 ATGAGCAACTCACCACAGGCTATCACTTGCAAAGGTGCCGTATGTTGGGGAATAGGAGAGGGAGTGAAGGTGGAAGAGATAGAAGTTGAGCCTCCAAAAGCTTCAGAAGTTCGAGTTAAGATGCTTTGTGCTAGTGTTTGCCATTCAGACATCTCTGCCACTGAAGGACTCCCACATGCTAATTATCCTCAAGTTCTAGGCCATGAAGGAATTGGTGTCGTGGAGAGCAAAGGGGAGGAAGTGAAGAATGTGGAGGCAGGGGATATGGTGATTCCATTGTGCATATCAGAGTGTGGAGAATGTGAGGTTTGCATAAAAGGGAAGAGCAACATATGCATGAGATATCCTATAAGGTTTAATGGGTTGATGGCAGACAACACTTCTAGAATGCGTGTGAGAGGTCAAAAGGCATATCATTGTATGCGTTGTGCCACATGGTGTGAGTATACGGTCATTGACGCTAACTATGTTCTCAAAGTTGAATCAGGCATTGATGCAGCTCACGGCAGCTTCATCTCTTGTGGCTTCTCTACTGGTTTTGGAGCTGCCTGGAAAGAAGCCATGGTTGAAGAAGGATCTAGTGTTGCTGTTTTTGGTCTTAGTGCCGTTGGATTAGGGGCTGTAAGTGCAGCAAAATTGATGGGGGCAACGAAGATAATTGGGATTGACAAAAATGAGAAGAAGAGAGAAAAGGGAGAAGCTTTTGGAATGACAGACTTTATATATCCTAACAAGTTATCTGCAGATAAGCCTCTTTCACAACAAGTCAAAGAACTAAGTGGTGAAATGGGAGTAGATTATTCTATTGAGTGCACCGGCGGTCCCTTTTTGCTCAATGAAGCCATGGAATCTACTAGAGTGGGAGGGGGCACAACTGTAGTAGTAAGTGCTGGAGCTGAATGTGCGCAGTTAAGTTATGCTACCATTCTTCATGGAAGAACATTGAAGGGTTGTGTATTTGGAGGCATAAAGCCCATCTCTGATCTTCCCTTTATAGCCCACATGTGTCACACAAAGGAAATTCCAATTCATGAACTTTGGACCCATGAGATCCACTTGGAAGATATAAGCAAAGCATTTGAGCTAATGAGACATCCAGATTGTGTCAAAGTTGTGATCAAGATGTGA 1128 0.4379 MSNSPQAITCKGAVCWGIGEGVKVEEIEVEPPKASEVRVKMLCASVCHSDISATEGLPHANYPQVLGHEGIGVVESKGEEVKNVEAGDMVIPLCISECGECEVCIKGKSNICMRYPIRFNGLMADNTSRMRVRGQKAYHCMRCATWCEYTVIDANYVLKVESGIDAAHGSFISCGFSTGFGAAWKEAMVEEGSSVAVFGLSAVGLGAVSAAKLMGATKIIGIDKNEKKREKGEAFGMTDFIYPNKLSADKPLSQQVKELSGEMGVDYSIECTGGPFLLNEAMESTRVGGGTTVVVSAGAECAQLSYATILHGRTLKGCVFGGIKPISDLPFIAHMCHTKEIPIHELWTHEIHLEDISKAFELMRHPDCVKVVIKM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2704g00001 375 Gene3D - 179 318 - -
Pral2704g00001 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Pral2704g00001 375 SUPERFAMILY GroES-like 5 185 IPR011032 -
Pral2704g00001 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Pral2704g00001 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Pral2704g00001 375 Gene3D - 14 370 - -
Pral2704g00001 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Pral2704g00001 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral2704g00001 375 SUPERFAMILY GroES-like 326 373 IPR011032 -
Pral2704g00001 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 336 IPR036291 -
Pral2704g00001 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2704g00001 Pral-Chr2704 6374 10815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2704g00001 35 367 Monolignol Biosynthesis Gene Families AT2G21730 25.444 6.26e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2704g00001 K00121 - gmx:100798341 481.1