Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2689g00001 ATGGAGAACAGATCAAGTGTTTTAATGGGAAGGTATGAATTAGGAAGATTGCTAGGGCAAGGTACTTTTGCAAAAGTGTACTATGCGCGAAGCACATCAACTAATCAGAGTGTGGCTATTAAGGTAATTGACAAAGATAAGGTTATGAAATCTGGGGAAGCCGAACGCATCAAGCGTGAAATATCTATCATGAGGAAGGTTAAACATCCCTATATTATACAGCTTCTTGAGGTTATGGCCACCAAGAGCAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAACTCTTCACAAAGTTAGCTAAAAAAGGAAAGCTCAAAGAGGATGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGATTTTTGCCACAGCAGAGGCGTGTACCACCGAGATATTAAACCAGAGAACCTTTTGTTGGATGAAAATGGGGATCTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGCGGAATCCAAGCGGGAAGATGGCCTGCTGCATACAACTTGTGGCACACCTGCATATGTTGCTCCTGAAGTCATTAAAAGGAAAGGGTATGATGGTGCCAAAGCTGATGTTTGGTCTTGTGGGGTAGTATTGTTCGTATTATTGGCAGGTTATCTCCCATTTCATGATCCAAATTTGGTAGAGATGTATAGGAAAATTGACAAGGCAGAATTTGAATGTCCTAATGGGTTCTCACCAGAAGTTCGCACACTTCTATGCAAGATGTTAAATCCAGATCCTGATGCTAGGATTTCCATGGAAAAGATTAGGGAGTGTGCTTGGTTTAAGAAAGGACCAAATTCTAAACATAAAAAACCTGTAGTGGGAAAGAAGGCTGTCTCTTCATCAGGTAAAAATCCTTCCACTCGAAGCGACGAAGCAGAAGCAAAGCAGGAGTCAGTCGTACCATCCAGTATAAATGCATTTGATATCATATCTCTTTCTGCTGGTTTTGATCTTTCTGTATTCTTTGAAGACGATTTTAAGAAGAGAGAAGCTAGATTTACCTCAAGACAACCTGCACCAGCTATCATCTCGAAGCTGGAAGAGGCTGCTAAGCTTCTGAAGATGAAAATAAAGAAGAAAGCCGCAGGATTGTTAAAGCTAGAGGGCCTCAAGGAAGGCAGAAAGGGTATTTTGTCCATTGATGCAGAGATCTTTGAGGTCACTCCGTATTTCCATCTGGTGGAGGTGAAAAAATCAGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATAAGGCCTGCTCTTCAGGATATTGTCTGGATTTGGCAAGGAGATGACCAATCACAGCAATCAGAGCAACAACTGCAGACGCATGAGCCGCAGCCACAGCAATAA 1365 0.4139 MENRSSVLMGRYELGRLLGQGTFAKVYYARSTSTNQSVAIKVIDKDKVMKSGEAERIKREISIMRKVKHPYIIQLLEVMATKSKIYFVMEYAKGGELFTKLAKKGKLKEDVAHKYFWQLINAVDFCHSRGVYHRDIKPENLLLDENGDLKVSDFGLSALAESKREDGLLHTTCGTPAYVAPEVIKRKGYDGAKADVWSCGVVLFVLLAGYLPFHDPNLVEMYRKIDKAEFECPNGFSPEVRTLLCKMLNPDPDARISMEKIRECAWFKKGPNSKHKKPVVGKKAVSSSGKNPSTRSDEAEAKQESVVPSSINAFDIISLSAGFDLSVFFEDDFKKREARFTSRQPAPAIISKLEEAAKLLKMKIKKKAAGLLKLEGLKEGRKGILSIDAEIFEVTPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWIWQGDDQSQQSEQQLQTHEPQPQQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2689g00001 454 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pral2689g00001 454 Gene3D Kinase associated domain 1, KA1 306 431 - -
Pral2689g00001 454 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2689g00001 454 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2689g00001 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 423 - -
Pral2689g00001 454 SUPERFAMILY Protein kinase-like (PK-like) 8 301 IPR011009 -
Pral2689g00001 454 CDD CIPK_C 312 426 - -
Pral2689g00001 454 FunFam Non-specific serine/threonine protein kinase 5 306 - -
Pral2689g00001 454 MobiDBLite consensus disorder prediction 272 303 - -
Pral2689g00001 454 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pral2689g00001 454 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Pral2689g00001 454 Gene3D Transferase(Phosphotransferase) domain 1 92 291 - -
Pral2689g00001 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Pral2689g00001 454 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2689g00001 454 FunFam Non-specific serine/threonine protein kinase 306 430 - -
Pral2689g00001 454 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Pral2689g00001 454 Pfam NAF domain 308 366 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2689g00001 Pral-Chr2689 5008 7676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2689g00001 1 435 CBL-interacting serine-threonine protein kinases AT5G58380 66.814 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral2689g00001 Pkinase 1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2689g00001 - - qsa:O6P43_020433 623.624