LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2687g00003	ATGAAGAAGAAGCATCCCGTTGTGGAGGTGGAGAAGAAGAAGAAGTATCCGATTGGTCCCGAGCATTATGAACTCTACGAGGAAATTGGCCAAGGCGTGAGTGCCACGGTTCACCGTGCTCTTTGCAAACCGTTCAATGAGACTGTAGCCATCAAAATTCTTGATTTTGAACGCGACAATGCTAATCTGAATAACATTTTTCGTGAAGCTCACACAATGAACCTAATTGACCACCCTAATGTCCTTAAATCGCACTGCTCCTTCGTTAGTGATCATAATTTGTGGTTTGTCATGCCATATATGGCTGGCGGTTCCTGTCTTCACATCTTAAAAGCCGCTTACCCTGATGGTTTTGAGGAGGTTGTAATAGCCACAATATTGCGAGAAGTGTTAAAGGGTTTAGAATATCTTCATCATCATGGGCATATACATCGCGATGTCAAAGCTGGGAACATTCTAATTGATGGCCATGGGGCAATCAAGCTTGGAGATTTTGGTGTATCTGCTTGTCTTTTTGATTCTGGTGACAGGCAACGCACACGCAATACATTTGTGGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAACAACTGCGTGGCTATGACTTTAAGGCTGATATCTGGTCATTTGGCATAACTGCATTGGAGCTTGCCCACGGTCATGCTCCTTTCTCAAAGTATCCACCAATGAAGGTGCTGCTGATGACATTGCAACATGCACCTCCAGGCCTTGATTACGAAAGGGATAACAAGTTCTCCCATACATTTAAAGACATGATTGCTAGCTGTCTAGTGAAAGATCCTTCAAAACGACCAACTGCTAAAAAGTTGTTAAAGCATTCATTCTTCAGGCAGGCACGTTCAAATGATTATATTTCACGAAAGCTTTTGGAGGGGCTTCCTGCTTTAGGTGATCGCATCAAAGCTTTAAAGATAAAAGAAGAAGACATGCTTGCTCAAGAGAAAATGCCTCATGGGCGAATGGAAGAAATATCTCAGAATGAATACAAGCGAGGAATTAGTGGCTGGAACTTCAATCTTGATGATATGAAGGCCCAGGCTTCCTTGATCCAGGATTCTGACGACCCCATAGATGATAATATAGGATGTTCAAATTCCTTTTCTACACCCAATGAACATGACAAGCCATCATCAAGTCAAAACCAAAATCCCTCTCAAATTTTAGACGTGGACAACACTGATGAGATGCAAAATATATCTGCTTCTGTCCCCATAGTTGGATCCACACTAAATGGCACCAAGTTAAAATGTGAGGATCATGATTCTAGCATCACCAGTTCAAGCCATAGGGAGGACATTTCACCGGACTCTTCATCGCTTCTTGATAACGAGGTTGATCATTACATGGATGAAAAATCTATCAGGGAGACTGGTGGGAGGTCTCTAGAGGAAACAGCTATTCATTCCCTTCGTGGTAGATTTTCAATGAATGTCTCCCACGAAGTTACACCTCCATCTATTCAGGGAGAAAGGGAGAAGCCGCAACATCAGCCCCAGAACAACCTAAACTGCAATGCGACTACAGTTCCCCTAACGAGGGATGATGTGCATGCTGAACTATCTTCAAAAGCTTCAAAATTGTCAGTAGCAAGTTCTGATGACAATGATGAGAAAGCAAAGGTACCAGTTGTTCAGCAGAGAGGACGGTTTAAGGTTACATCTGAAAATGTTGAACTAGAAAAGGTGGGCCCATCTTCTCCTGTACAGCAAAAGAATCAGGCATGA	1749	0.4322	MKKKHPVVEVEKKKKYPIGPEHYELYEEIGQGVSATVHRALCKPFNETVAIKILDFERDNANLNNIFREAHTMNLIDHPNVLKSHCSFVSDHNLWFVMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKAGNILIDGHGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLRGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQHAPPGLDYERDNKFSHTFKDMIASCLVKDPSKRPTAKKLLKHSFFRQARSNDYISRKLLEGLPALGDRIKALKIKEEDMLAQEKMPHGRMEEISQNEYKRGISGWNFNLDDMKAQASLIQDSDDPIDDNIGCSNSFSTPNEHDKPSSSQNQNPSQILDVDNTDEMQNISASVPIVGSTLNGTKLKCEDHDSSITSSSHREDISPDSSSLLDNEVDHYMDEKSIRETGGRSLEETAIHSLRGRFSMNVSHEVTPPSIQGEREKPQHQPQNNLNCNATTVPLTRDDVHAELSSKASKLSVASSDDNDEKAKVPVVQQRGRFKVTSENVELEKVGPSSPVQQKNQA	582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2687g00003	582	Gene3D	Phosphorylase Kinase; domain 1	11	99	-	-
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	366	395	-	-
	Pral2687g00003	582	CDD	STKc_OSR1_SPAK	21	284	-	-
	Pral2687g00003	582	ProSiteProfiles	Protein kinase domain profile.	23	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	426	449	-	-
	Pral2687g00003	582	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	12	574	IPR047173	GO:0043539
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	488	515	-	-
	Pral2687g00003	582	Gene3D	Transferase(Phosphotransferase) domain 1	104	335	-	-
	Pral2687g00003	582	SMART	serkin_6	23	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	567	582	-	-
	Pral2687g00003	582	FunFam	serine/threonine-protein kinase BLUS1 isoform X1	104	337	-	-
	Pral2687g00003	582	ProSitePatterns	Protein kinases ATP-binding region signature.	29	52	IPR017441	GO:0005524
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	563	582	-	-
	Pral2687g00003	582	FunFam	Serine/threonine-protein kinase BLUS1	12	100	-	-
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	531	555	-	-
	Pral2687g00003	582	SUPERFAMILY	Protein kinase-like (PK-like)	21	285	IPR011009	-
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	360	395	-	-
	Pral2687g00003	582	Pfam	Protein kinase domain	23	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2687g00003	582	MobiDBLite	consensus disorder prediction	538	552	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2687g00003	Pral-Chr2687	11914	17479	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2687g00003	12	582	MAP Kinase Kinase Kinase Kinase	AT1G79640	62.712	0.0	722

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Pral2687g00003		Pkinase	5.3e-62	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2687g00003	K08835		-	qsa:O6P43_017908	814.683