Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2677g00003 ATGCTCTCTCAGTTTCGTCACCATCATTTGGTATCTCTTATTGGTTACTACAACGATGACAATGAAATGATCCTTATCTATGAGTTCATGGCTCGTGGGACTTTCCGTGAGCATCTTTATGATTCTGAAAACCAACCACTTTCTTGGAATCAAAGGGTGGAGATTTGCCTAGGTGCTGCTCGAGGACTGCATTACCTACATACAGGGGCAAAGCATGCAATCATTCATCGTGACGTCAAGTCGAAAAACATCTTAATAGATGAAAACTGGATGGCCAAGATTTCTGATTTTGGACTATCCAAAATGGGACCTGGAAGTATCTCTAGATCAAACATTAGCATAAGCACATTAGTGAAAGGAAGCATTGGATACATGGATCCAGAATACTACACATGTCAAATATTGACGGAAAAGTCAGACTTGTACTCATTTGGAGTTGTGTTGCTAGAGGCATTATGTGGGAGGCCTCCTATTCTCCGTGCCGTGGAGAGGGAGCAGCAAAACCTTGTAGAGTGGTTTAGAAAATGTGTTGATCAAAATGAGATTTGTGAGACGGTGGATCCAAACTTGAAGGGAAGTATAACAGAAGAGTGCTTAAACGCATACACTGAGATTGCGTTGAAATGCTTGGCTAATAATGGGAATGAACGGCCATCCATGGGCGACGTGATGTTGGGGCTAGAGTCTTTGATGGAGTCGCTGAACGAAGCAGAGAAGAAAAAGCTTGGCGGGACTCTAAATGAGGAGGTTACTGTTGAAGAAGGCATCGAGGAAGTGAGGTTTGACGTGGACAAAATTGAAGGAAGGAGCAAGGAAAGAGCTCTGATCAGGAAAGCGACAAAAGCTGTAGAAAGAGAAGCAGGTTTTACGAGCAGTGATGGATCAAGGAATTAA 894 0.4306 MLSQFRHHHLVSLIGYYNDDNEMILIYEFMARGTFREHLYDSENQPLSWNQRVEICLGAARGLHYLHTGAKHAIIHRDVKSKNILIDENWMAKISDFGLSKMGPGSISRSNISISTLVKGSIGYMDPEYYTCQILTEKSDLYSFGVVLLEALCGRPPILRAVEREQQNLVEWFRKCVDQNEICETVDPNLKGSITEECLNAYTEIALKCLANNGNERPSMGDVMLGLESLMESLNEAEKKKLGGTLNEEVTVEEGIEEVRFDVDKIEGRSKERALIRKATKAVEREAGFTSSDGSRN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2677g00003 297 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2677g00003 297 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Pral2677g00003 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Pral2677g00003 297 SUPERFAMILY Protein kinase-like (PK-like) 1 225 IPR011009 -
Pral2677g00003 297 FunFam Receptor-like protein kinase FERONIA 30 249 - -
Pral2677g00003 297 Gene3D Transferase(Phosphotransferase) domain 1 31 252 - -
Pral2677g00003 297 PANTHER OS07G0166700 PROTEIN 1 232 IPR045272 GO:0004714|GO:0006468
Pral2677g00003 297 Pfam Protein tyrosine and serine/threonine kinase 1 224 IPR001245 GO:0004672|GO:0006468
Pral2677g00003 297 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2677g00003 Pral-Chr2677 55435 56686 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2677g00003 1 297 Receptor kinase-like Gene Family AT3G51550 50.168 8.94e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral2677g00003 PK_Tyr_Ser-Thr 8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2677g00003 - - pcin:129321450 420.239