Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2674g00052 ATGTCCTCGGTTCTCAGAAAACCATCGCTAAGTGCATCCCCATTCCATTCTTCAACCCACAGCCTAAAACTGAGGCCCATATCCCCCCTTTTCCCTATTCAGCGATTCTATAGACTACCCCAATTTCGAGTTTCCCTTACAACCCAGAACTCCAGCAATCGTCCTTCCATTATTCCTTCAAAGGGCAAAGTTTCCAGTACTTCCTCACTTTCTCAAACTCTTCACTTCTTCAAACCCTGGCTTCTGTCTGAGCATAAAACCGTTCTCTTGGGCTGGCTCTGCAGCGTCATATCTGTTTACTCCCTCTCCAAAATCCTTTCTAAAGTCGGGAATGTTTCTGCTACTATCAGCAGCATTGACGCTATCAAGTTGCGAGACGAAGGTTTAGTATTGGGGGGTTTGTTGATTGCCCGGTTGTTTGCAAGTTTTGGGCAGCAAGCTTTTTTATGGGAAGCTGCACTGAACGCGGTATATAAGCTTAGGGTTCACGTTTTCGACAGGATTTTGGAGAGAGAATTGGGATATTTTGAAGGCATGGATGGTGTTTCGTCCGGGGACATTGCGTTTCGGATCACTGCGGAAGCTTCGGATATTGCTGATACTTTGTATGCTCTGCTCAGTACCATAATTCCCAGCACTCTGCAGCTATCTGCTATGATGATGCGAATGTTGGCGATCAGTCCTGCCCTTTCTTTGATTTCAGCTGTGGTTATTCCTTGTATGGGACTTGTTGTTGCGTTTCTTGGTCAGAAACTTCGTTCAATATCTAAAAGGGCACATCTTAGCATTGCCACTCTCTCGGCATATCTAAATGAGGTCCTTCCTGCAATTCTTTTTGTGAAAGCAAACAATGCAGATATGTATGAGAGCAGCAGGTTTAAGAGGCTGGCTAGGATCGACTTTTTTGAACGCTTGAACAAGAAGAGGATGAAGGCAGTTATTCCTCAGATTATACAAGCTATTTATTTCGGAGTGCTATTTGTACTTTGTGCGGGTTCAATAGTGGTTTCAAGAGGATCATTCAATGGCTGTAACTTAGTGTCGTTTGTGACATCATTGCTCTTTTTGATTGAACCGATCCAGGATGTGGGAAAAGCATACAATGAATTGAGGCAGGGAGAACCAGCTATTGAACGCTTGTTTGATCTGACCAGGTTCGCAGATAAGGTGGCTGAGAAACCAGATGCTGTTGATTTAGACTCTGTTAGAGGGGAGATAAAGTTTTGTAATGTCTCATTTAAGTACAGTGAAGACATGTCACTCGTTCTGAATGGACTGAATCTTCACATTGGAGCTGGAGAGATAGTTGCTCTTGTTGGTCCCTCTGGTGGAGGGAAAACTACACTTATAAAACTTCTGCTTCGTCTTTATGATCCAGTATCTGGCTGTATACTTGTTGATAATCATAACATCCAAAGCATTCGGTTGCAAAGTTTGAGAAGGCATGTTAGTCTTGTTTCTCAGGATATAACACTTTTTTCAGGTTCAGTTGCTGAAAACATTGGTTACAAGGATCTGACAGCAGAAATTGACATGGAGAGGGTAAAACATGCAGCACAAACTGCTTATGCTGATGAATTTATAAGAGAACTTCCAGAAGGATATAATACCAATATTGGACCAAGGGGCTCAACTTTAAGTGGAGGACAAAGGCAAAGGCTAGCCATTGCCAGGGCTCTATATCAGAATTCTTCTATATTAATACTGGATGAGGCAACTTCTGCTTTAGATAGCAAATCTGAGGAGTTGGTGAGACAAGCTGTAAAGCGATTGATGAAAAATCACACTGTGCTGATAATTGCCCATCGCATGGAAACGGTTCGGATGGCTAAACGAGTATTCCTCTTGGATAGGGGGAAGCTAGAAGAGTTGCCTCGTTCGACTATATTGGGTGGTCACAAGGACTCGTTGTTATCATCTGGAGTGGTGATTTAA 1935 0.43 MSSVLRKPSLSASPFHSSTHSLKLRPISPLFPIQRFYRLPQFRVSLTTQNSSNRPSIIPSKGKVSSTSSLSQTLHFFKPWLLSEHKTVLLGWLCSVISVYSLSKILSKVGNVSATISSIDAIKLRDEGLVLGGLLIARLFASFGQQAFLWEAALNAVYKLRVHVFDRILERELGYFEGMDGVSSGDIAFRITAEASDIADTLYALLSTIIPSTLQLSAMMMRMLAISPALSLISAVVIPCMGLVVAFLGQKLRSISKRAHLSIATLSAYLNEVLPAILFVKANNADMYESSRFKRLARIDFFERLNKKRMKAVIPQIIQAIYFGVLFVLCAGSIVVSRGSFNGCNLVSFVTSLLFLIEPIQDVGKAYNELRQGEPAIERLFDLTRFADKVAEKPDAVDLDSVRGEIKFCNVSFKYSEDMSLVLNGLNLHIGAGEIVALVGPSGGGKTTLIKLLLRLYDPVSGCILVDNHNIQSIRLQSLRRHVSLVSQDITLFSGSVAENIGYKDLTAEIDMERVKHAAQTAYADEFIRELPEGYNTNIGPRGSTLSGGQRQRLAIARALYQNSSILILDEATSALDSKSEELVRQAVKRLMKNHTVLIIAHRMETVRMAKRVFLLDRGKLEELPRSTILGGHKDSLLSSGVVI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2674g00052 644 MobiDBLite consensus disorder prediction 1 20 - -
Pral2674g00052 644 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 89 372 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2674g00052 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 643 IPR003439 GO:0005524
Pral2674g00052 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 624 IPR027417 -
Pral2674g00052 644 CDD ABC_6TM_exporters 128 380 - -
Pral2674g00052 644 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 114 623 IPR039421 -
Pral2674g00052 644 SMART AAA_5 432 620 IPR003593 GO:0016887
Pral2674g00052 644 Pfam ABC transporter 423 574 IPR003439 GO:0005524
Pral2674g00052 644 Gene3D - 396 640 IPR027417 -
Pral2674g00052 644 FunFam ABC transporter related 75 386 - -
Pral2674g00052 644 FunFam ABC transporter ATP-binding protein 399 640 - -
Pral2674g00052 644 ProSitePatterns ABC transporters family signature. 546 560 IPR017871 GO:0005524|GO:0016887
Pral2674g00052 644 Pfam ABC transporter transmembrane region 117 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2674g00052 644 SUPERFAMILY ABC transporter transmembrane region 83 385 IPR036640 GO:0005524|GO:0016020
Pral2674g00052 644 Gene3D ABC transporter type 1, transmembrane domain 62 385 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2674g00052 Pral-Chr2674 282332 286850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2674g00052 129 641 Calmodulin-binding Proteins AT2G36910 30.370 2.37e-60 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2674g00052 K02021 - cave:132192232 815.453