Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2674g00051 ATGTCCTCGGTTCTCAGAAAACCATCGCTAAGTGCATCCCCATTCCATTCTTCAACCCACAGCCTAAAACTGAGGCCCATATCCCCCCTTTTCCCTATTCAGCGATTCTATAGACTACCCCAATTTCGAGTTTCCCTTACAACCCAGAACTCCAGCAATCGTCCTTCCATTATTCCTTCAAAGGGCAAAGTTTCCAGTACTTCCTCACTTTCTCAAACTCTTCACTTCTTCAAACCCTGGCTTCTGTCTGAGCATAAAACCGTTCTCTTGGGCTGGCTCTGCAGCGTCATATCTGTTTACTCCCTCTCCAAAATCCTTTCTAAAGTCGGGAATGTTTCTGCTACTATCAGCAGCATTGACGCTATCAAGTTGCGAGACGAAGGATTTTGGAGAGAGAATTGGGATATTTTGAAGGCATGGATGGTGTTTCGTCCGGGGACATTGCGTTTCGGATCACTGCGGAAGCTTCGGATATTGCTGATACTTTGTATGCTCTGCTCAGTGTGGACCATAATTCCCAGCACTCTGCAGCTATCTGCTATGATGATGCGAATGTTGGCGATCAGTCCTGCCCTTTCTTTGATTTCAGCTGTGGTTATTCCTTGTATGGGACTTGTTGTTGCGTTTCTTGGTCAGAAACTTCGTTCAATATCTAAAAGGGCACATCTTAGCATTGCCACTCTCTCGGCATATCTAAATGAGGTCCTTCCTGCAATTCTTTTTGTGAAAGCAAACAATGCAGATATGTATGAGAGCAGCAGGTTTAAGAGGCTGGCTAGGATCGACTTTTTTGAACGCTTGAACAAGAAGAGGATGAAGGCAGTTATTCCTCAGATTATACAAGCTATTTATTTCGGAGTGCTATTTGTACTTTGTGCGGGTTCAATAGTGGTTTCAAGAGGATCATTCAATGGCTGTAACTTAGTGTCGTTTGTGACATCATTGCTCTTTTTGATTGAACCGATCCAGGATGTGGGAAAAGCATACAATGAATTGAGGCAGGGAGAACCAGCTATTGAACGCTTGTTTGATCTGACCAGGTTCGCAGATAAGGTGGCTGAGAAACCAGATGCTGTTGATTTAGACTCTGTTAGAGGGGAGATAAAGTTTTGTAATGTCTCATTTAAGTACAGTGAAGACATGTCACTCGTTCTGAATGGACTGAATCTTCACATTGGAGCTGGAGAGATAGTTGCTCTTGTTGGTCCCTCTGGTGGAGGGAAAACTACACTTATAAAACTTCTGCTTCGTCTTTATGATCCAGTATCTGGCTGTATACTTGTTGATAATCATAACATCCAAAGCATTCGGTTGCAAAGTTTGAGAAGGCATGTTAGTCTTGTTTCTCAGGATATAACACTTTTTTCAGGTTCAGTTGCTGAAAACATTGGTTACAAGGATCTGACAGCAGAAATTGACATGGAGAGGGTAAAACATGCAGCACAAACTGCTTATGCTGATGAATTTATAAGAGAACTTCCAGAAGGATATAATACCAATATTGGACCAAGGGGCTCAACTTTAAGTGGAGGACAAAGGCAAAGGCTAGCCATTGCCAGGGCTCTATATCAGAATTCTTCTATATTAATACTGGATGAGGCAACTTCTGCTTTAGATAGCAAATCTGAGGAGTTGGTGAGACAAGCTGTAAAGCGATTGATGAAAAATCACACTGTGCTGATAATTGCCCATCGCATGGAAACGGTTCGGATGGCTAAACGAGTATTCCTCTTGGATAGGGGGAAGCTAGAAGAGTTGCCTCGTTCGACTATATTGGGTGGTCACAAGGACTCGTTGTTATCATCTGGAGTGGTGATTTAA 1821 0.4289 MSSVLRKPSLSASPFHSSTHSLKLRPISPLFPIQRFYRLPQFRVSLTTQNSSNRPSIIPSKGKVSSTSSLSQTLHFFKPWLLSEHKTVLLGWLCSVISVYSLSKILSKVGNVSATISSIDAIKLRDEGFWRENWDILKAWMVFRPGTLRFGSLRKLRILLILCMLCSVWTIIPSTLQLSAMMMRMLAISPALSLISAVVIPCMGLVVAFLGQKLRSISKRAHLSIATLSAYLNEVLPAILFVKANNADMYESSRFKRLARIDFFERLNKKRMKAVIPQIIQAIYFGVLFVLCAGSIVVSRGSFNGCNLVSFVTSLLFLIEPIQDVGKAYNELRQGEPAIERLFDLTRFADKVAEKPDAVDLDSVRGEIKFCNVSFKYSEDMSLVLNGLNLHIGAGEIVALVGPSGGGKTTLIKLLLRLYDPVSGCILVDNHNIQSIRLQSLRRHVSLVSQDITLFSGSVAENIGYKDLTAEIDMERVKHAAQTAYADEFIRELPEGYNTNIGPRGSTLSGGQRQRLAIARALYQNSSILILDEATSALDSKSEELVRQAVKRLMKNHTVLIIAHRMETVRMAKRVFLLDRGKLEELPRSTILGGHKDSLLSSGVVI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2674g00051 606 Pfam ABC transporter transmembrane region 170 321 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2674g00051 606 Gene3D - 366 585 IPR027417 -
Pral2674g00051 606 MobiDBLite consensus disorder prediction 1 20 - -
Pral2674g00051 606 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524|GO:0016887
Pral2674g00051 606 CDD ABC_6TM_exporters 170 342 - -
Pral2674g00051 606 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 168 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2674g00051 606 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 170 585 IPR039421 -
Pral2674g00051 606 SMART AAA_5 394 582 IPR003593 GO:0016887
Pral2674g00051 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 586 IPR027417 -
Pral2674g00051 606 Pfam ABC transporter 385 536 IPR003439 GO:0005524
Pral2674g00051 606 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 605 IPR003439 GO:0005524
Pral2674g00051 606 SUPERFAMILY ABC transporter transmembrane region 167 347 IPR036640 GO:0005524|GO:0016020
Pral2674g00051 606 Gene3D ABC transporter type 1, transmembrane domain 172 365 IPR036640 GO:0005524|GO:0016020
Pral2674g00051 606 FunFam ABC transporter ATP-binding protein 361 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2674g00051 Pral-Chr2674 282332 286850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2674g00051 358 603 Calmodulin-binding Proteins AT2G36910 45.382 1.06e-57 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2674g00051 K02021 - gmx:100788075 700.664