Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2674g00035 ATGGAAAACATGGCACCGGGATATCGGTTCTACCCAACTGAAGAGGAACTGATTACCTTCTATTTGCGAAGAAAGCTCGAAGGAGATCAGAGGGAGGACATCAACCGGGTCATACCTGTGCTTGATATTTATGAATATAATCCTTGGGATCTCCCACAGGTGTCGGGAGAGGCGAGCCTGAGAGACACGGAGCAGTGGTTCTTCTTCATTCCGAGGCAAGAAAGCGAAGCTCGCGGAGGAAGACCAAGACGACTCACAACAACAGGCTACTGGAAGGCCACTGGCTCTCCTAACCATGTCTATTCCTCTGAGAATCGCGTCATCGGCATGAAAAGAACCATGGTTTTCTACAACGGAAGAGCCCCCAACGGCCGCAAAACCGATTGGAAGATGAACGAGTACAAGGCCATCGGAGGCCAGCCATCCTCAACTCGCCCATCTCCTCTGTTAAGGCAGGAATACAGTTTATGCAGGGTGTACAAGAAATCAAAGTGCCTGCGAGCGTTTGATAGAAGGCCACCTCCGATGAGGGAGATGGATGCTAATGAGGGCTCTAGCTCAGCGACGTTTCATCAACAAGTTCAAAACCCAGCATCGGGTTCATCGAGTAGACCCATAGGGACCGCAAGCTCTCCAGAGAGTTCATCATCAGGAGACCATGGCCAAGCTTCGCATAGTGGGGAAGCGACGACGGGTCAAATGGATTTGGAGGATGAGCCCTTGTTGGATTGGGAGCAAATTGACTGGTTTCTTGCCAAGCATGACTCAACCGTGTGA 777 0.5097 MENMAPGYRFYPTEEELITFYLRRKLEGDQREDINRVIPVLDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSENRVIGMKRTMVFYNGRAPNGRKTDWKMNEYKAIGGQPSSTRPSPLLRQEYSLCRVYKKSKCLRAFDRRPPPMREMDANEGSSSATFHQQVQNPASGSSSRPIGTASSPESSSSGDHGQASHSGEATTGQMDLEDEPLLDWEQIDWFLAKHDSTV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2674g00035 258 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Pral2674g00035 258 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
Pral2674g00035 258 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pral2674g00035 258 MobiDBLite consensus disorder prediction 182 231 - -
Pral2674g00035 258 MobiDBLite consensus disorder prediction 168 238 - -
Pral2674g00035 258 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
Pral2674g00035 258 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2674g00035 Pral-Chr2674 197291 199389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2674g00035 2 249 NAC Transcription Factor Family AT5G22380 48.193 9.45e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2674g00035 NAM 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2674g00035 - - gmx:100777948 336.265