Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral2674g00030 | ATGTGGGCAAGCGCAGAAGGTGGTGCTCCGGAGGTCACTCTAGAGACTTCCATGGGTCCTTTCACCGTTGAGCTGTACTACAAGCATGCCCCCAGAACCTGCAGAAACTTCATTGAACTCTCTCGCAGAGGCTATTACGATAACGTTAAGTTCCACAGAATCATCAAGGACTTCATAGTGCAAGGCGGAGATCCCACTGGAACAGGAAGGGGAGGAGAGTCCATTTATGGTCCAAAATTTGAAGATGAGATAAGACAAGTTGAAGCACACGGAGCTGGTATTTTATCCATGGCAAACGGGCCCAATACGAATGGTAGCCAGTTCTTCATTACTTTGGCGCCATGCCCTTAACTTATAAGGAGTAAACACACCATATTTGGAAGAGTTTGTCGGGGGATGGAAATTATCAAGAGACTTGGCAGTGTGCAAACTGACAACAATGATAGGCCTATCCATGACGTGGAGATACTGAGGACGTCGGTCAAGGATTGA | 492 | 0.4715 | MWASAEGGAPEVTLETSMGPFTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGPKFEDEIRQXVEAHGAGILSMANAXPNTNGSQFFITLAPCPXLIRSKHTIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVEILRTSVKD | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral2674g00030 | 165 | PIRSF | Peptidylpro_ismrse | 3 | 165 | IPR024936 | GO:0003755 | |
| Pral2674g00030 | 165 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 162 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2674g00030 | 165 | SUPERFAMILY | Cyclophilin-like | 11 | 163 | IPR029000 | - | |
| Pral2674g00030 | 165 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 46 | 63 | IPR020892 | GO:0003755|GO:0006457 | |
| Pral2674g00030 | 165 | FunFam | Peptidyl-prolyl cis-trans isomerase | 2 | 165 | - | - | |
| Pral2674g00030 | 165 | Gene3D | - | 2 | 165 | IPR029000 | - | |
| Pral2674g00030 | 165 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 9 | 162 | IPR044666 | - | |
| Pral2674g00030 | 165 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2674g00030 | 165 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 123 | 138 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2674g00030 | 165 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2674g00030 | 165 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 94 | 109 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral2674g00030 | 165 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 15 | 163 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral2674g00030 | Pral-Chr2674 | 166653 | 169349 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral2674g00030 | 12 | 163 | U-box Gene Family | AT5G67530 | 46.711 | 1.88e-44 | 152 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral2674g00030 | K12733 | - | gmx:100786302 | 300.827 |