Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2674g00026 ATGGCAGCGATCACGAGATTGATTGGCACTCGTTCTGCTTTGTCTCGCTTCTCGCTTGGGTCTCCTGCTCTCCTCAGTAGAGGAATTGCTTACAAACTCTTCGTTGGAGGACTATCATTTGTTACAACAGAGAAGGGATTGTCAGAAGCATTTTCTGGGTACGGTCAAGTTGTTGAAGCAAAAATTGTGATGGACAAGGTATCAGACAGATCAAAAGGGTTTGGGTTTGTCACCTTTGCCTCGGAGGATGAGGCCGAGAATGCCATAACAGGGATGAATGGGAAGGCACTAAACGGTCGCGTTATCTTTGTGGATTATGCAAAACCCAAATCCAATATTGGTGGTGGAATGCCAGTTGCCAGAGGACCTCCTGAACCAACAGCACACAGCTAA 393 0.4682 MAAITRLIGTRSALSRFSLGSPALLSRGIAYKLFVGGLSFVTTEKGLSEAFSGYGQVVEAKIVMDKVSDRSKGFGFVTFASEDEAENAITGMNGKALNGRVIFVDYAKPKSNIGGGMPVARGPPEPTAHS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2674g00026 130 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 102 IPR000504 GO:0003723
Pral2674g00026 130 Gene3D - 25 113 IPR012677 -
Pral2674g00026 130 SMART rrm1_1 32 105 IPR000504 GO:0003723
Pral2674g00026 130 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 29 116 - -
Pral2674g00026 130 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 109 IPR000504 GO:0003723
Pral2674g00026 130 SUPERFAMILY RNA-binding domain, RBD 31 122 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2674g00026 Pral-Chr2674 148707 151171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2674g00026 33 111 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 1.85e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2674g00026 - - pcin:129307886 211.46