Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2673g00006 ATGGACTCCTCTTTCTCAATCTTCCACTCCCCAACCTCCGACTTCTCCTCCGACTCCTCCTTCGCGTCCTCGGATTCCTTCTTCTCCTCCAACTTCCATAACTCTTACCTCCCCTTCAACGAGAATGACCCCGACGAGATGCTTCTCTACGGCATGATTTCCAACGCCAACCACAATCACGGCTCCGATGAATCTTTCAGTTCTGTCAAGGAGGAGGAGGTCAGCTCCGATGCCACTGCTTCGGGCGGTGCTGCCACTCCCAAGGAGAAGACATACAGAGGCGTACGGCGGCGCCCTTGGGGGAAATTCGCGGCAGAGATAAGGGATTCCACCAGACACGGCATAAGGGTGTGGCTGGGGACCTTCGATAGTGCAGAGGAGGCGGCTTTAGCTTACGATCAAGCCGCGTTTTCCATGAGGGGATCGGCGGCGATACTGAACTTCCCCGTGGAGAGGGTGAGGGAGTCTCTAAAAGAGATGAACCACGGATCAGAAGAAGGTTGCTCGCCGGTGGTGGCTCTGAAGAGAAAGCACTCGTTGAGAAGAAAAGTGAATAGTAACAAGAAGAAGAACAAGGTGGATGACAGAGATATGAGAATAGACAATGTGGTGGTGCTGGAAGATCTCGGCTCAGATTACTTGGAACAACTCTTGATGTCCTCGGAGAGTCCTAGGCCTTCAGGATCCCATTGCCTCAATGTTCATTAA 708 0.5268 MDSSFSIFHSPTSDFSSDSSFASSDSFFSSNFHNSYLPFNENDPDEMLLYGMISNANHNHGSDESFSSVKEEEVSSDATASGGAATPKEKTYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEEAALAYDQAAFSMRGSAAILNFPVERVRESLKEMNHGSEEGCSPVVALKRKHSLRRKVNSNKKKNKVDDRDMRIDNVVVLEDLGSDYLEQLLMSSESPRPSGSHCLNVH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2673g00006 235 MobiDBLite consensus disorder prediction 61 92 - -
Pral2673g00006 235 CDD AP2 92 150 IPR001471 GO:0003700|GO:0006355
Pral2673g00006 235 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Pral2673g00006 235 Pfam AP2 domain 92 141 IPR001471 GO:0003700|GO:0006355
Pral2673g00006 235 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Pral2673g00006 235 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Pral2673g00006 235 PANTHER DNA-BINDING DOMAIN 55 221 IPR044808 GO:0003700|GO:0009873
Pral2673g00006 235 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Pral2673g00006 235 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Pral2673g00006 235 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Pral2673g00006 235 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2673g00006 Pral-Chr2673 42835 43772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2673g00006 7 222 AP2-EREBP Transcription Factor Family AT3G23240 59.633 5.11e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2673g00006 AP2 2.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2673g00006 K14516 - cave:132179353 251.906