Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2672g00003 ATGATTAGCGGGGGTGTATGCAGTTTCCGAATGTGTTGCTCGCATCTCCATTGCTTCTCAGAGAAATCTCTACTCCGACCAGCTCGGTTCTCTTTCACTTGCCGCCGCCGCCGCCTTTTGGCCACCGCATCCTCGTTTTCTGGCGCCAATAAGAAGGACACCAAAGAGAAGGTCATCGTCATTTCTGGCCCCACTGGGTCTGGTAAAAGCCGCCTTGCTTTAGAGCTGGCGAAGCGGCTCAATGGTGAAATTATCAGTGCGGATTCTGTCCAGGTGTACCAGGGTCTTGATGTTGGATCAGCAAAGCCCTCCAAAAATGATAGAAAGGAAGTACCGCATCATCTGGTTGACATATTGCACCCATCTGAAGATTATTCTGTGGGGCGATTTTTTGAGGATGCAAGGCAAGCTACAAGATGCATTCTTGATAATGGTCACGTTCCTATTGTTGTTGGGGGAACTGGATTATACTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAGGCCTCTCCAGAGACTACATCTGAAGCGTATTTGGCTTTGGGTGAGTTAGAGAGAAATGGGCAATGGGATGCAGCTGTGCAGTTGGTTGTAGAAGCAGGTGACCCAAAGGCACAATTTATAACTCCCAATGACTGGTATCGATTGCGACGAAGCCTTGAGATTATTAAGTCTAGTGGATCACCTCCGTCTGCTTTTGGGGTACCATATGAATTTTTCAGGGAACAGGGAGATGCTAGTGTTATGGACAACTCTGGCTGTTCTGATGGCAATGCTAATTGCGCTGGAATGAAAGAAACATCCTCAAATTTGGACTATGAGTTCATGTGTTTTTTCCTTTCTACGCGAAGGCTTGACCTCTATAGATCAATTGATTACCGCTGCGAAGATATGCTATTAGAGAGGGATGGCTTATTGTCTGAGGCTCAATGGCTTCTTAATGTTGGTCTTCATCCTAATTCAAATTCAGCGACAAAAGCAATTGGTTACAGGCAGGCCATGGACTACTTAGTAAGATGCAGAGAGCAAGGGGGTCAGAGTTCAGTTCGAGAATTCTTCTATTTTTTAACTGAATTTCAGAAGGCATCTAGGAATTTTGCCAAAAGACAGCTGACATGGTTTCGAAATGAACATATATACCACTGGCTTGATGCTTCTAGACGTCTGCTTTGTGGTTCATAA 1188 0.452 MISGGVCSFRMCCSHLHCFSEKSLLRPARFSFTCRRRRLLATASSFSGANKKDTKEKVIVISGPTGSGKSRLALELAKRLNGEIISADSVQVYQGLDVGSAKPSKNDRKEVPHHLVDILHPSEDYSVGRFFEDARQATRCILDNGHVPIVVGGTGLYLRWFIYGKPDVPKASPETTSEAYLALGELERNGQWDAAVQLVVEAGDPKAQFITPNDWYRLRRSLEIIKSSGSPPSAFGVPYEFFREQGDASVMDNSGCSDGNANCAGMKETSSNLDYEFMCFFLSTRRLDLYRSIDYRCEDMLLERDGLLSEAQWLLNVGLHPNSNSATKAIGYRQAMDYLVRCREQGGQSSVREFFYFLTEFQKASRNFAKRQLTWFRNEHIYHWLDASRRLLCGS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2672g00003 395 Gene3D - 55 391 IPR027417 -
Pral2672g00003 395 Pfam IPP transferase 91 379 - -
Pral2672g00003 395 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 55 383 IPR039657 -
Pral2672g00003 395 Gene3D - 166 236 - -
Pral2672g00003 395 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 58 235 IPR018022 GO:0008033
Pral2672g00003 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 177 IPR027417 -
Pral2672g00003 395 FunFam tRNA dimethylallyltransferase 9 166 237 - -
Pral2672g00003 395 Hamap tRNA dimethylallyltransferase [miaA]. 58 389 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2672g00003 Pral-Chr2672 26394 32491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2672g00003 61 339 C2H2 Transcription Factor Family AT2G27760 27.178 6.33e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2672g00003 K00791 - qsa:O6P43_029165 606.675