Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2670g00007 ATGGAGCCAGTTTCATGTCCCAGAAAAACCCCATTTAGAATAGAAACCAAGAACTTATCATGCAGATTGCGCAGCCAGCTTGATGAGTTCAGAAGTCTGTTTTTTGGTTCAAGTCCAAGGAGCAGTGCTAAGCTGATCTTAAAAGATGTAAATTGTGAGGCCAAACCTGGAGAACTCACAGTTATTGCTGGTCCTAGTGGAGCTGGAAAGACCACACTGCTAGAGATTCTTGCAGGGAGAGTATCCCTATGTGAGGTTTCAGGGCAAGTTCTTGTCAATCATAGGCCCATGGACTTAAAGCAATTCAGAAGAACATGTGGGTATGTCACACAAGAAGATACATTGTTCCCTTCGCTTACAGTTAGAGAAACACTCATGTATAGTGCACTTCTGAGGCTTCCTGGGGGGAGAAAAGTGGCTGCTGCAAGAGTTGCAGGGTTGATGAAGGAGCTTGGGTTGGATCACATTGCAGATTCAAGAATTGGTACTGGTCGTGGTGGATCATCAGACCAAGGTATATCAGGTGGGGAAAGGCGAAGAGTTTCCATCGGAGTTGATTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCTGCGCTGAACATAGTCTCAATGCTTAGATTAATGGCATTTAATCAAGGTAAGACTATCGTTTTAACCATTCACCAACCTGGGTTTCGGATTTTACAGCTGGTTGATCATCTTGTTCTGCTCTCGGATGGATTTGTCATGCATAATGGGTCACTGAATCTTCTTGAGGCTAGGCTCAAGTTGGCTGGGCATCATATTCCACATCATGTCAATGTCCTTGAATTTGCCCTTGATGTCATGGGATGCTTGGTGATACAAACTTCAGAATCTAGGAACAATCAACTTCTTCTCAGAGACAGGGAGGAACAAGTTTGTAAAATGAGAATGCCGTGCTCATTGTATGTCAGAGAAAAGGCTGTTCAGTACCCAAATTCTCCAGTGGAGGAGATTCTAATCCTAGGACAAAGGTTTTGCTGCAACATATTCAGAACCAAGCAACTGTTCGTCACCAGAGTCATACAAGCCTTAGTAGCTGGATTTATACTAGGGACTATATTTTTTAATGTTGGCAACCGAGAAGGCCAAGTTGCCTTACAGACACGAAGTGGATTTTTTGCTTTCAGCCTTACCTTTTTGTTATCTTCGACAACAGAAGGCCTGCCTATTTTCTTGCAAGAGAAAAGGACTTTGATGAAAGAGACCTCAAGAGGAGCTTATAGAGTATCTTCATATGTTCTAGCAAACACACTAGTGTTTCTTCCTTTCCTTTTGATGGTTGGTCTTCTATATTCTACTCCAGTTTATTGGCTGGTAGGTTTAAGGAAGGAAATAGATGGGTTCCTATACTTTTCTCTGGTTGTTTGGTTGGTGGTCCTCATGTCAAATTCTCTTGTAGCTTGTTTCAGTGCTCTGGTGCCAAATTTCATCCTGGGAACGTCAGTGATTGCAGGGTTAATGGGTTCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGGAAACATACCCAGATACTGGATTTTCATGCACTATATAAGTCTATTCAAGTACCCATTCGAGTGTTTTATGATAAATGAATATGGAGGAAAACAAGGGAAAGCCAGATGCCTAGAGAATAGGAATGGAGAATGCAGTTTATCTGGAGATGAGTTCTTAAGACAGCAAGGTCTGAGAGAGTCCCAAAGATGGAGTAATTTGGCTGTGATATTGAGTTTCATAATTGGGTATAGAGTGCTATGCTTTTTGATTCTGTGGTATAGATGCCACAGAACTAGAAATAATAGATCAGCTTCATAA 1854 0.4164 MEPVSCPRKTPFRIETKNLSCRLRSQLDEFRSLFFGSSPRSSAKLILKDVNCEAKPGELTVIAGPSGAGKTTLLEILAGRVSLCEVSGQVLVNHRPMDLKQFRRTCGYVTQEDTLFPSLTVRETLMYSALLRLPGGRKVAAARVAGLMKELGLDHIADSRIGTGRGGSSDQGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNIVSMLRLMAFNQGKTIVLTIHQPGFRILQLVDHLVLLSDGFVMHNGSLNLLEARLKLAGHHIPHHVNVLEFALDVMGCLVIQTSESRNNQLLLRDREEQVCKMRMPCSLYVREKAVQYPNSPVEEILILGQRFCCNIFRTKQLFVTRVIQALVAGFILGTIFFNVGNREGQVALQTRSGFFAFSLTFLLSSTTEGLPIFLQEKRTLMKETSRGAYRVSSYVLANTLVFLPFLLMVGLLYSTPVYWLVGLRKEIDGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKGNIPRYWIFMHYISLFKYPFECFMINEYGGKQGKARCLENRNGECSLSGDEFLRQQGLRESQRWSNLAVILSFIIGYRVLCFLILWYRCHRTRNNRSAS 617
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral2670g00007 617 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Pral2670g00007 617 CDD ABCG_EPDR 37 256 - -
Pral2670g00007 617 Pfam ABC-2 type transporter 335 546 IPR013525 GO:0016020|GO:0140359
Pral2670g00007 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 266 IPR027417 -
Pral2670g00007 617 SMART AAA_5 56 251 IPR003593 GO:0016887
Pral2670g00007 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 274 IPR003439 GO:0005524
Pral2670g00007 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 597 - -
Pral2670g00007 617 FunFam ABC transporter G family member 10 31 280 - -
Pral2670g00007 617 Pfam ABC transporter 47 201 IPR003439 GO:0005524
Pral2670g00007 617 Gene3D - 14 275 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral2670g00007 Pral-Chr2670 18692 20545 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2670g00007 27 261 Calmodulin-binding Proteins AT2G36910 29.555 3.06e-12 68.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2670g00007 K05681 - gmx:100776372 976.081