Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2670g00003 ATGAGTTGTTTCTGTTGTATTATCAGAAAAAAGGGATGTGTCTCAGCCGCACAACCAACCGAAATTGATCTTGAGGTTTCAGACATTCAGAATGTAAACCTTTACACCTACAAGGAACTCCGAATTGCCACAGAAGGTTTTAGCCCAGAAAACAAGATAGGGCAAGGCGGTTTCGGATCTGTCTATAAGGGAAAACTGAGAGATGGGACTCTTGCTGCTATAAAGGTGCTATCAGCTGACTCGCATCAAGGGGTTCGGGAATTCCTGACAGAAATCAAGGTGATCACCAGCATAGAGCATGAGAACCTAGTTAAGTTGTTCGGATGCTGTGTGGAAGGAAATCACAGGATTTTGGTGTATGGCTATCTTGAAAACAACAGCCTAGCTCAAACACTTATTGGTGGAGGCCATAGTAACATTCCATTCAGTTGGCCTGTGCGGCGGAACATTTGCATTGGCGTTGCCCGAGGCCTAGCATTCCTTCATGAGGAGGTTGAACCACATATTATCCATAGAGACATTAAAGCAAGCAATATACTACTTGATAAAGACCTGCAGCCCAAAATTTCTGATTTTGGTCTGGCAAAGCTTCTTTCTCCAAACCTGACCCATATTAGTACACGTGTTGCTGGTACAGCTGGTTATCTAGCGCCTGAGTATGCAATACGAAGTCAAGTAACAAGAAGATCAGATGTGTACAGTTTTGGAGTTCTACTATTGGAAATTGTTAGTGGGAGGTGTAACACAAATAGACGGTTACCTCCTGAAGAACATTATCTTCTTCCAAAGGCATGGACTATGTATGAAAGTGGGGAGCTGGAGAAACTGGTGGATGCATTGCTAGAAGACAACTTTAATATTGAGGAGGCATGCCAGTTTTGTAAAATCGGTCTTCTCTGCGCTCAGGATTCTCCTCAGCTCCGACCATCAATGTCTACTGTGCTTGGCATGTTGATGGGTGAAATTGACGTTGATGAAAAGAAAATTACAAAGCCAGGATTACTGTTTGAGTTTGTCGAATCCAAAGATGAAAAGATGCAAAAAGCTGAGGCTGAAGTGGAAAATACGTCTTCCCTTGGCATCACAGGGAAGCAAGATGTTTCCTCTTTGACAGAGACCACGGCCTCTTTTGCTACCATGACCTTCACTTCAATTTATGATCGGAGCTGTTAA 1173 0.4322 MSCFCCIIRKKGCVSAAQPTEIDLEVSDIQNVNLYTYKELRIATEGFSPENKIGQGGFGSVYKGKLRDGTLAAIKVLSADSHQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLAQTLIGGGHSNIPFSWPVRRNICIGVARGLAFLHEEVEPHIIHRDIKASNILLDKDLQPKISDFGLAKLLSPNLTHISTRVAGTAGYLAPEYAIRSQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPPEEHYLLPKAWTMYESGELEKLVDALLEDNFNIEEACQFCKIGLLCAQDSPQLRPSMSTVLGMLMGEIDVDEKKITKPGLLFEFVESKDEKMQKAEAEVENTSSLGITGKQDVSSLTETTASFATMTFTSIYDRSC 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2670g00003 390 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Pral2670g00003 390 FunFam cold-responsive protein kinase 1 18 122 - -
Pral2670g00003 390 SMART serkin_6 47 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2670g00003 390 Coils Coil 339 359 - -
Pral2670g00003 390 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 330 - -
Pral2670g00003 390 Pfam Protein kinase domain 49 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2670g00003 390 ProSiteProfiles Protein kinase domain profile. 47 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2670g00003 390 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pral2670g00003 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pral2670g00003 390 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Pral2670g00003 390 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 352 - -
Pral2670g00003 390 SUPERFAMILY Protein kinase-like (PK-like) 27 318 IPR011009 -
Pral2670g00003 390 CDD STKc_IRAK 53 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2670g00003 Pral-Chr2670 14816 18362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2670g00003 35 324 Receptor kinase-like Gene Family AT1G53430 56.207 2.66e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2670g00003 Pkinase 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2670g00003 - - gmx:100797257 598.586