Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2660g00005 ATGGATTGTTCGTCTTGGGTCAACACGTCCTTGGATCTCAACATTAGACCTCATCATCATATGCTTCGCGAAGAAGTTCCCAAAAAGGAGGTGGAAAACAAATTTTTCTTATCTGGAAGGAAATCTTCTGTAAAAGAAGAGTCATGTCAGACAAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTGAGTGCAGAGAACAAGAAGTTGACAGAAATGCTCACTGAGATGTGTGAGAATTACGATGCTCTAAGAAGACACTTGGCTGAATACATGAGAAATAATCCTCAAAAGGATACCAACAGCACCTTCCCATCAAAGAAAAGGAAGCCTGATAACAGCAGCTACAACAACAACACTAATAATAATTCCATGGCGATTAATGGCACCGCGGAGAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCTAAGGAAGGCACCAACAAAGCAAAAGTTTCCAAAGCTTATGTCAAGACAGAATCATCTGATACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAATATGGGCAAAAAGTGACCAGAGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTCGCTCCAAGCTGTCCAGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAATCTATTCTGGTTGCAACTTATCTAGGGGAGCACAATCATCCTCATCCTTCTCAAATGGAGACAACAACTGCATCAGGATCTAGTCGTTTTGTGAGCCAAGCTTCAGTACCATGTTCATCAGCATCTTTGAGCTCGTCCTCTGCGCCAACAACAATTGCCTTTGACTTGACAAAATCCAAGTCCGGCGCCAACAACATGAATGCCACTCCCGCCACTCCCGCCAAGAACCCTAAAGCGAAACTCGATTCGCCAGAAGTCCCTCAGGTTTTAGTGGAACAGATGGCCTCTTCCTTGACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCTGCTATTCGGGGAGAATATCCCAAAAGGATTAAAGACCAGTGGAATTCCAAAGTTTCTTACTTTAACTGGATCATTCTTAAATCATGGCCGGGGATCTCTTTGTTGTAA 1077 0.4336 MDCSSWVNTSLDLNIRPHHHMLREEVPKKEVENKFFLSGRKSSVKEESCQTSGALEDELKRVSAENKKLTEMLTEMCENYDALRRHLAEYMRNNPQKDTNSTFPSKKRKPDNSSYNNNTNNNSMAINGTAESCSTDEESCKKPKEGTNKAKVSKAYVKTESSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMETTTASGSSRFVSQASVPCSSASLSSSSAPTTIAFDLTKSKSGANNMNATPATPAKNPKAKLDSPEVPQVLVEQMASSLTKDPNFRAALVAAIRGEYPKRIKDQWNSKVSYFNWIILKSWPGISLL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2660g00005 358 SUPERFAMILY WRKY DNA-binding domain 164 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2660g00005 358 MobiDBLite consensus disorder prediction 222 241 - -
Pral2660g00005 358 MobiDBLite consensus disorder prediction 93 134 - -
Pral2660g00005 358 MobiDBLite consensus disorder prediction 273 294 - -
Pral2660g00005 358 MobiDBLite consensus disorder prediction 92 156 - -
Pral2660g00005 358 ProSiteProfiles WRKY domain profile. 163 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2660g00005 358 Pfam WRKY DNA -binding domain 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2660g00005 358 SMART WRKY_cls 168 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2660g00005 358 Coils Coil 52 93 - -
Pral2660g00005 358 FunFam WRKY transcription factor 40 153 230 - -
Pral2660g00005 358 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 327 IPR044810 GO:0003700
Pral2660g00005 358 Gene3D WRKY domain 150 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2660g00005 358 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2660g00005 Pral-Chr2660 81667 83829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2660g00005 4 328 WRKY Transcription Factor Family AT1G80840 49.245 4.48e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2660g00005 WRKY 1.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2660g00005 - - pcin:129289519 523.087