Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2660g00002 ATGGAGGAGGGACAGAGACAGTCGAGGAGCATCATCTTCAACAAGTATGAGATGGGGAAGCTCCTTGGCCAAGGGAATTTCGCAAAGGTCTACCATGGAAGAAACCTCGTCACCAACGAGAGTGTTGCGATTAAGGTGATTAAGAAGGAGAGGCTTGAAAAAGGGAAGGACAAGCTCATGAAGCAGATCAAGCGAGAAGTCTCTATAATGCGATTGGTCCGGCACCCACACATCGTGGAGCTGAAAGAAGTCATGGCGACCAAAGGAAAGATCTTTCTGGTTATGGAGTATGTTAAAGGCGGCGAGTTGTTCGCTAAAGTCGCGAAAGGAAAATTGAAGGAAGATTTGGCGAGAAAGTATTTCCAGCAATTGATTTCCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACTCACCGGGATCTCAAGCCTGAGAATCTCTTCCTCGACGAAAACGAGGATCTTAAGGTCTCCGACTTTGGCCTTTCTGCGTTGCCGGAGCAGCGCCGGTCCGACGGGATGCTCGTGACTCCGTGTGGGACGCCGGCTTACGTGGCGCCGGAGGTCTTGAAGAAGAAAGGCTACGATGGGTCGAAAGCAGATATCTGGTCTTGTGGGGTAATTCTCTATGCTCTGCTTTCTGGGTATCTGCCATTTCAAGGTGAGAATGTGATGAGAATTTACAAGAAGGCATTCAAAGCTCAGTACGTATTACCAGATTGGATTTCACCCGAAGCAAAGAATTTGATCTCAAAATTATTAGTGGTCGACCCAGAAAAGAGATATTCGATCGAAGACATCATGAAGGATCCGTGGTTTCAATATGGGTTCATGAGGCCAATCGCATTTTCAATGAGGGAACCAAATTTTGAAGATTTCGCAGATAATGACAACATCGAAGAAGTCGAAGAAATGGTGGGAGGAGGACGACAGGGAGGGGAAAATAATAATAATAATAACCCAGCACAATCACGTCCATTTTACAATGCGTTTGAGATAATTTCATCATTGTCACATGGGTTTGATCTGAGGAGATTGTTTGAGACGAGAAAGAGGTCGCCGTCGATGTTCACGACAAAGTTCTCGGCAGCGGCGGTGGTGGGGAAGCTGGAGGCGGTGGCGAGGAAGTTGAATCTGAGGATAACGGGGAGGAAGGAGTACATGATGAGGATGCAGGGGACGACGGAGGGAAGGAAAGGGAAGCTGGGGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCCAAGTCCTCCGGCGATACGTTGGAGTACGTGAAACTGTGTGAGGAACAAGTGAGACCTGCGCTGAAAGACATAGTCTGGAGCTGGCAAGGTGACGCCAATCCTCATCCATAA 1371 0.4916 MEEGQRQSRSIIFNKYEMGKLLGQGNFAKVYHGRNLVTNESVAIKVIKKERLEKGKDKLMKQIKREVSIMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFAKVAKGKLKEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKAFKAQYVLPDWISPEAKNLISKLLVVDPEKRYSIEDIMKDPWFQYGFMRPIAFSMREPNFEDFADNDNIEEVEEMVGGGRQGGENNNNNNPAQSRPFYNAFEIISSLSHGFDLRRLFETRKRSPSMFTTKFSAAAVVGKLEAVARKLNLRITGRKEYMMRMQGTTEGRKGKLGMTVEVFEVAPEVAVVEFSKSSGDTLEYVKLCEEQVRPALKDIVWSWQGDANPHP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2660g00002 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pral2660g00002 456 ProSiteProfiles NAF domain profile. 322 347 IPR018451 GO:0007165
Pral2660g00002 456 FunFam Non-specific serine/threonine protein kinase 9 316 - -
Pral2660g00002 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 442 - -
Pral2660g00002 456 Gene3D Transferase(Phosphotransferase) domain 1 98 276 - -
Pral2660g00002 456 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Pral2660g00002 456 CDD CIPK_C 328 442 - -
Pral2660g00002 456 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Pral2660g00002 456 FunFam Aurora kinase A 8 101 - -
Pral2660g00002 456 Pfam Protein kinase domain 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2660g00002 456 Gene3D Kinase associated domain 1, KA1 322 447 - -
Pral2660g00002 456 SUPERFAMILY Protein kinase-like (PK-like) 12 291 IPR011009 -
Pral2660g00002 456 SMART serkin_6 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2660g00002 456 ProSiteProfiles Protein kinase domain profile. 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2660g00002 456 Pfam NAF domain 326 381 IPR004041 GO:0007165
Pral2660g00002 456 FunFam Non-specific serine/threonine protein kinase 322 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2660g00002 Pral-Chr2660 12456 14435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2660g00002 7 453 CBL-interacting serine-threonine protein kinases AT5G10930 60.626 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral2660g00002 Pkinase 2e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2660g00002 - - gmx:100804244 706.827