Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2656g00020 ATGGATATTGTTCATTTCATTACTGTTGTTGTTTCCATACTTATCTCTTCTTTACAAGCTTCTGGGGCAGTTGATTCCATCCTTCAACCCAATTCCTTAATGACTGATGGCATGACATTAGTGTCCAAAGGTGGAAGCTTTGAACTTGGCTTCTTCAGTCCTGGAAGCTCTGGTAAACACTATCTGGGAATTTGGTACAAGAACGTCCCCATTCAGACAGTTGTTTGGGTAGCAAACAGAGACAAATCAATCCATGGTTCCTCTGTCACTGCTAAATTAATGCTCAACAGCACAGGCAATCTCGTCCTGGCCCAAGATGATACTATTATTTGGAATTCAACTTCTCTGAAACAAGTGCAGAATCCAGTGGCTGAGCTCTTGGATTCTGGAAATCTTGTGGTTCGAGATGAGAAGGACGATGATCCAGAAGCATATTTGTGGCAAAGCTTTGACTACCCAAGTGACACACTGCTCTCGGGGATGAAATTGGGATATGACCTGAGAACAGGTTTGAATAGACGTCTAACAGCCTGGAAGACTCCGGAAGATCCATCTCCAAGTGACTTTTATCTAACTCTAGCCCCCCGTGACTATCCTGAATTTTATATAATGAAAGAAGGTTCAAAGTTCTTCAGAAATGGACCATGGAATGGCGTGGGACTTAGTGGCTCACCAGAACTGAAAGAGAATTACATTTTCGATTTTGAGTTCGTATCCACAAGAAATGAGGCTTTCTATCGGTACACCCTCAAGAATAGTTCTATAATCTCAAGGTACACGATCAACCTAACTGAGCAAGCAGATATTCGCTATGTGTGGTTGAAAGGTGATGAAAATTGGAAGCTTTATGCTAAAAAGCCTAGTGATTACTGTGACCAATATAAGCTGTGCGGGCCCAATGGGAAATGTGTCATTACTGAATCACCCCCGTGTCAATGCCTTAAAGGGTTCGTGCCTAAGTCACCACAGAAATGGAACTCAGTGGACTGGTCCGATGGATGTGTCCGCAATAAACCTCTAAACTGCTCTGAAAAATACGCAGACAAGTTTATGAAAATGGAAGGGTTGAAATTGCCGGAAACTACAAATTCTTGGCTTGATGAGACAATGAATCTAGTGCAATGCAGAGAGAAGTGCTTGGATAATTGTTCTTGCATGGCCTACACTAATTCAGATATCAGAGGGGCAGGTAGTGGTTGCGTCTTGTGGTTTGGTGATCTAATTGATATCAAGTATTATGCATCAGGAGGAGAGGTTTTGTATGTTCGAATGCCTGCTCCAGAATTAGAACCTGGGAAAAATAAAAAGTTGATAATGATCGTTGCCATCACCATTGCTGTGATTTTATGCATTCTTTTAGTTGGGAGCTATTTCATTTACAGAGTCTGCAGGAAGAGGATTGAAAAATCAAGAAATGCAGGAGTTGAAATTCAAAACAATGAAAGAGATGATCTAGATCTCCCACTGTTCGATCTTCCAACAATAGCACAAGCCACTGAAAATCTTTCAGAGAAGAACAAAATCGGAGAAGGTGGATTTGGACCTGTATATTGGGGAAAGTTACTAAATGGACAAGAAATTGCTGTGAAGAAGCTTTCAAGAAGATCCGAACTTGGATTTATTGAATTCAAAAATGAAGTAAAATTTATAGCCAAACTCCAACATCGAAATCTAGTAAAACTTCTTGGCTGCTGCGTCCATGAACAAGAAAAGTTGTTGGTATATGAGTACATGCCAAATAGAAGTTTGGACTCCTTCATTTTTGATGAAACCAAAAGGAAATTGTTGGACTGGTTTAAGCGCTTTCACATTATTATGGGTATTGGTCGAGGTCTTTTATATCTTCATCAAGATTCAAGATTACGAATAATTCATAGAGATTTGAAAGCAAGCAATATTTTACTTGATGATAAGTTGATTCCAAAAATATCAGATTTTGGGTCAGCTAAAACTTTTGGAGAAGAGGAAAAAGAAGGCAGTACAAAGAGAGTAGTGGGCACTTATGGATACATGGCTCCTGAATACGCAGCAGATGGGCTATATTCAGTGAAATCCGATGTTTTTAGTTATGGTATATTAATGCTAGAGATTATTAGAGGAAAGAAAAACAGAGGATTTTATCTAGAAGACTCAACACACAATCTTGCTAGCCATGCATGGTTACTATGGAAAGAAGGAAAAGTTTTAGAATTGCTTGACAAGAACATGCAGGAACTGTGCAATGTATCAGAAGTAGTAAGGTGCATTCATGTGAGTCTGTTGTGTGTGCAACAAAATCCAGATGATAGACCCACCATAGCATCTGCAATTTTGATGTTGGAGAGTGAAGTGGCACTCCCTGAACCTAAACTGCCCGATCAAACAGTTTTCTGCAACAAGAGGAATTTAGCTTGTATTGGCCTTCCCTATACACTCTACAATTCCATGGACATTGTTTCTTTCATCACTACCGTTGTTTCCATACTTGTCCCTTCTTTCCAAGCTTCTATGGCAGTTGGTTCCATCCTTCAGTCTAATTCCCCAATGAGTGATCGCATGAGAATATTTTCTAAAGGTGGAAGCTTCGAACTTGGCTTCTTCACTCCTGGAAACTCCGGTAAACAGTATCTGGGGATTTGGTACAGAAGCATCCCAATTCAGACAGTTGTTTGGGTAGCAAACAGAGATAACCCGATCAATGGTTCATCTACCACTGCTACTTTAACACTCAACAGCACAGGTAGTCTTGTCCTCACCCAAAATGATAGTGTTATTTGGTACTCAACTCCTCTGAAACCAGTACAGAATTCAGTGGCTGAGCTCCTAGATTCGGGAAACCTTGTGGTACGACATGAGAGAGGCCAGAACTCAGAAGCCTATTTGTGGCAAAGCTTCGACTATCCGACTGACACACTGCTCTCGGGGATGAAATTGGGATGCGACCTAAGAACAGGTTTAAATAGACGTCTAACATCTTGGAAGACTCCAGAAGATCCATCTCCTGGTGATTTTTCTATAACTGTCGACCCTCGTAATCATCCTGAATTATATATACTGAGAGGAAAATCAAAGTTCTTCAGAACTGGACCTTGGAATGGCGTGGGATTTGGTGGCTCCCCGGAACTGAAACAAAATCCTATTTTTGATTTTGGGTTCGTATCTACTAGAGATGAGATATACTATTATTGGCACAGCCTCAAGAATAGTTCTGTTATCTCAAGGTATGTGATCAACCAAACTGAGGAGGCTCGAATTCGATATGTGTGGACGAAAGGTGAGGAAAATTGGAAGAGTTATACTAAAAAGCCTAGTGACAATTGTGATCAATATAAGTGGTGTGGACCTAATGGGAAATGTGTTATCACTGGATCACCCCCATGCCAATGCCTAAAAGGGTTCACCCCCAAGTCACCTCAGAAATGGAACTCAGTGGACTGGTCTGATGGATGTGTCCGCAATAAACCTCTGAACTGCTCTGAAAATGGCACAGACAAATTTATAAAATTGGAAGGATTAAAAGTGCCTGAAACTACAGACGCTTGGCTTGACAAGGCAATGAACCTAGAGCAATGCAGAGAGAAGTGCTTGGAAAATTGTTCTTGCATGGCCTATACTAATTCAGATATTAGAGGGGGAGGTAGTGGTTGTGCCTTATGGTTTGGTGATCTAAATGATATCAGATCTTATGCATCTGGAGGACAGGATCTGTATGTTCGAATGCCTGCTTCAGAATTAGAATCTGGGAACAATAAAAAGTTGATAATGATCGTTGCCATCGCCGTTGCTGTGATTTTATGCATGCTTTTAGTGGGGGGCTATCTCATTTGTAAAGTCTACAGGAAGAGGATTGAGAAATCAAAAAATGCAGAAGTTGAGATTCAAAACAATGAAAGAGAAGATCTAGATCTCCCACTGTTTGACCTTCCAATAATAGAACAAGCCACCGAAAATTTTTCAGAGAAGAACAAAATCGGACAAGGTGGATTTGGACCTGTATATTGGGTAATTCAATGTTTGAGTCATGAACTTAGAATAATCACTGTGTATTTTATGAATAGCACAATTTCAGTACACTCAAAAA 4060 0.4039 MDIVHFITVVVSILISSLQASGAVDSILQPNSLMTDGMTLVSKGGSFELGFFSPGSSGKHYLGIWYKNVPIQTVVWVANRDKSIHGSSVTAKLMLNSTGNLVLAQDDTIIWNSTSLKQVQNPVAELLDSGNLVVRDEKDDDPEAYLWQSFDYPSDTLLSGMKLGYDLRTGLNRRLTAWKTPEDPSPSDFYLTLAPRDYPEFYIMKEGSKFFRNGPWNGVGLSGSPELKENYIFDFEFVSTRNEAFYRYTLKNSSIISRYTINLTEQADIRYVWLKGDENWKLYAKKPSDYCDQYKLCGPNGKCVITESPPCQCLKGFVPKSPQKWNSVDWSDGCVRNKPLNCSEKYADKFMKMEGLKLPETTNSWLDETMNLVQCREKCLDNCSCMAYTNSDIRGAGSGCVLWFGDLIDIKYYASGGEVLYVRMPAPELEPGKNKKLIMIVAITIAVILCILLVGSYFIYRVCRKRIEKSRNAGVEIQNNERDDLDLPLFDLPTIAQATENLSEKNKIGEGGFGPVYWGKLLNGQEIAVKKLSRRSELGFIEFKNEVKFIAKLQHRNLVKLLGCCVHEQEKLLVYEYMPNRSLDSFIFDETKRKLLDWFKRFHIIMGIGRGLLYLHQDSRLRIIHRDLKASNILLDDKLIPKISDFGSAKTFGEEEKEGSTKRVVGTYGYMAPEYAADGLYSVKSDVFSYGILMLEIIRGKKNRGFYLEDSTHNLASHAWLLWKEGKVLELLDKNMQELCNVSEVVRCIHVSLLCVQQNPDDRPTIASAILMLESEVALPEPKLPDQTVFCNKRNLACIGLPYTLYNSMDIVSFITTVVSILVPSFQASMAVGSILQSNSPMSDRMRIFSKGGSFELGFFTPGNSGKQYLGIWYRSIPIQTVVWVANRDNPINGSSTTATLTLNSTGSLVLTQNDSVIWYSTPLKPVQNSVAELLDSGNLVVRHERGQNSEAYLWQSFDYPTDTLLSGMKLGCDLRTGLNRRLTSWKTPEDPSPGDFSITVDPRNHPELYILRGKSKFFRTGPWNGVGFGGSPELKQNPIFDFGFVSTRDEIYYYWHSLKNSSVISRYVINQTEEARIRYVWTKGEENWKSYTKKPSDNCDQYKWCGPNGKCVITGSPPCQCLKGFTPKSPQKWNSVDWSDGCVRNKPLNCSENGTDKFIKLEGLKVPETTDAWLDKAMNLEQCREKCLENCSCMAYTNSDIRGGGSGCALWFGDLNDIRSYASGGQDLYVRMPASELESGNNKKLIMIVAIAVAVILCMLLVGGYLICKVYRKRIEKSKNAEVEIQNNEREDLDLPLFDLPIIEQATENFSEKNKIGQGGFGPVYWVIQCLSHELRIITVYFMNSTISVHSK 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2656g00020 1353 Gene3D - 21 150 IPR036426 -
Pral2656g00020 1353 Gene3D - 828 958 IPR036426 -
Pral2656g00020 1353 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 150 - -
Pral2656g00020 1353 Pfam PAN-like domain 342 410 IPR003609 -
Pral2656g00020 1353 Pfam PAN-like domain 1151 1219 IPR003609 -
Pral2656g00020 1353 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Pral2656g00020 1353 CDD PAN_AP_plant 339 425 - -
Pral2656g00020 1353 SUPERFAMILY alpha-D-mannose-specific plant lectins 881 1026 IPR036426 -
Pral2656g00020 1353 CDD B_lectin 31 153 IPR001480 -
Pral2656g00020 1353 ProSiteProfiles EGF-like domain profile. 1096 1132 IPR000742 -
Pral2656g00020 1353 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 764 - -
Pral2656g00020 1353 ProSiteProfiles PAN/Apple domain profile. 1151 1234 IPR003609 -
Pral2656g00020 1353 SMART ntp_6 345 424 IPR003609 -
Pral2656g00020 1353 SMART ntp_6 1154 1233 IPR003609 -
Pral2656g00020 1353 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Pral2656g00020 1353 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Pral2656g00020 1353 ProSiteProfiles Bulb-type lectin domain profile. 833 955 IPR001480 -
Pral2656g00020 1353 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Pral2656g00020 1353 ProSiteProfiles Protein kinase domain profile. 502 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00020 1353 Pfam Protein kinase domain 504 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00020 1353 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Pral2656g00020 1353 Gene3D Transferase(Phosphotransferase) domain 1 578 781 - -
Pral2656g00020 1353 Pfam D-mannose binding lectin 881 987 IPR001480 -
Pral2656g00020 1353 Pfam D-mannose binding lectin 73 179 IPR001480 -
Pral2656g00020 1353 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 829 958 - -
Pral2656g00020 1353 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2656g00020 1353 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Pral2656g00020 1353 Pfam S-locus glycoprotein domain 1019 1130 IPR000858 GO:0048544
Pral2656g00020 1353 CDD PAN_AP_plant 1148 1234 - -
Pral2656g00020 1353 SUPERFAMILY Protein kinase-like (PK-like) 487 788 IPR011009 -
Pral2656g00020 1353 SMART blect_4 31 153 IPR001480 -
Pral2656g00020 1353 SMART blect_4 839 961 IPR001480 -
Pral2656g00020 1353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral2656g00020 1353 FunFam Os04g0303100 protein 872 1017 - -
Pral2656g00020 1353 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Pral2656g00020 1353 CDD B_lectin 850 961 IPR001480 -
Pral2656g00020 1353 FunFam Os04g0303100 protein 64 210 - -
Pral2656g00020 1353 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Pral2656g00020 1353 Gene3D Phosphorylase Kinase; domain 1 1268 1345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2656g00020 Pral-Chr2656 96266 104208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2656g00020 424 785 Receptor kinase-like Gene Family AT4G23230 51.099 2.07e-114 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2656g00020 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2656g00020 - - tcc:18593897 1409.05